Publications

YearPublicationPMID
2021Cazares D, Cazares A, Figueroa W, Guarneros G, Edwards RA, Vinuesa P. (2021). "A Novel Group of Promiscuous Podophages Infecting Diverse Gammaproteobacteria from River Communities Exhibits Dynamic Intergenus Host Adaptation.". mSystems. 6(1):-. [doi:10.1128/mSystems.00773-20]33531404
2021Córdoba-Castro, L, Salgado-Morales, R, Torres, M, Martínez-Aguilar, L, Lozano, L, Vences-Guzmán, M, Guan, Z, Dantán-González, E, Serrano, M, Sohlenkamp, C. (2021). "Ornithine Lipids in Burkholderia spp. Pathogenicity.". Frontiers in molecular biosciences. 7():-. [doi:10.3389/fmolb.2020.610932]33469548
2020Margos, G, Castillo-Ramirez, S, Cutler, S, Dessau, R, Eikeland, R, Estrada-Peña, A, Gofton, A, Graña-Miraglia, L, Hunfeld, K, Krause, A, Lienhard, R, Lindgren, P, Oskam, C, Rudolf, I, Schwartz, I, Sing, A, Stevenson, B, Wormser, G, Fingerle, V. (2020). "Rejection of the name Borreliella and all proposed species comb. nov. placed therein". International Journal Of Systematic And Evolutionary Microbiology. 70(5):3577-3581. [doi:10.1099/ijsem.0.004149]32320380
2020Villaseñor-Altamirano AB, Moretto M, Maldonado M, Zayas-Del Moral A, Munguía-Reyes A, Romero Y, García-Sotelo JS, Aguilar LA, Aldana-Assad O, Engelen K, Selman M, Collado-Vides J, Balderas-Martínez YI, Medina-Rivera A. (2020). "PulmonDB: a curated lung disease gene expression database.". SCIENTIFIC REPORTS. 10(1):514-514. [doi:10.1038/s41598-019-56339-5]31949184
2020Cabañas, N, Becerra, A, Romero, D, Govezensky, T, Espinosa-Aguirre, J, Camacho-Carranza, R. (2020). "Repetitive DNA profile of the amphibian mitogenome.". Bmc Bioinformatics. 21(1):197-. [doi:10.1186/s12859-020-3532-8]32429835
2020Sanjuan, J, Delgado, M, Girard, L. (2020). "Editorial: Microbial Control of the Nitrogen Cycle.". Frontiers in Microbiology. 11():950-. [doi:10.3389/fmicb.2020.00950]32477318
2020Narváez-Barragán DA, Tovar-Herrera OE, Torres, M, Rodríguez M, Humphris S, Toth IK, Segovia L, Serrano M, Martínez-Anaya C. (2020). "Expansin-like Exl1 from Pectobacterium is a virulence factor required for host infection, and induces a defence plant response involving ROS, and jasmonate, ethylene and salicylic acid signalling pathways in Arabidopsis thaliana.". SCIENTIFIC REPORTS. 10(1):7747-7747. [doi:10.1038/s41598-020-64529-9]32385404
2020Ferruz N, Lobos F, Lemm D, Toledo-Patino S, Farías-Rico JA, Schmidt S, Höcker B. (2020). "Identification and Analysis of Natural Building Blocks for Evolution-Guided Fragment-Based Protein Design.". Journal Of Molecular Biology. 432(13):3898-3914. [doi:10.1016/j.jmb.2020.04.013]32330481
2020Kim, J, Darlington, A, Salvador, M, Utrilla, J, Jiménez, J. (2020). "Trade-offs between gene expression, growth and phenotypic diversity in microbial populations". CURRENT OPINION IN BIOTECHNOLOGY. 62():29-37. [doi:10.1016/j.copbio.2019.08.004]31580950
2020Pech-Canul, Á, Rivera-Hernández, G, Nogales, J, Geiger, O, Soto, M, López-Lara, I. (2020). "Role of Sinorhizobium meliloti and Escherichia coli Long-Chain Acyl-CoA Synthetase FadD in Long-Term Survival". Microorganisms. 8(4):470-. [doi:10.3390/microorganisms8040470]32225039
2020Martínez-Romero, E, Aguirre-Noyola, J, Taco-Taype, N, Martínez-Romero, J, Zuñiga-Dávila, D. (2020). "Plant microbiota modified by plant domestication.". Systematic And Applied Microbiology. 43(5):126106-. [doi:10.1016/j.syapm.2020.126106]32847781
2020Becerra-Rivera, V, Arteaga, A, Leija, A, Hernández, G, Dunn, M. (2020). "Polyamines produced by Sinorhizobium meliloti Rm8530 contribute to symbiotically relevant phenotypes ex planta and to nodulation efficiency on alfalfa.". MICROBIOLOGY-SGM. 166(3):278-287. [doi:10.1099/mic.0.000886]31935179
2020Veeragoni, S, Lange, B, Serrano, M, Nawrath, C, Bauer, S, Schäffner, A, Thordal-Christensen, H, Durner, J, Gaupels, F. (2020). "Mutant Muddle: Some Arabidopsis eds5 Mutant Lines Have a Previously Unnoticed Second-Site Mutation in FAH1 .". Plant Physiology. 182(1):460-462. [doi:10.1104/pp.19.01125]31685644
2020Ide, A, Hernández, V, Medina-Aparicio, L, Carcamo-Noriega, E, Girard, L, Hernández-Lucas, I, Dunn, M. (2020). "Genetic regulation, biochemical properties and physiological importance of arginase from Sinorhizobium meliloti". MICROBIOLOGY-SGM. 166(5):484-497. [doi:10.1099/mic.0.000909]32216867
2020Castro-Jaimes, S, Bello-López, E, Velázquez-Acosta, C, Volkow-Fernández, P, Lozano-Zarain, P, Castillo-Ramírez, S, Cevallos, M. (2020). "Chromosome Architecture and Gene Content of the Emergent Pathogen Acinetobacter haemolyticus .". Frontiers in Microbiology. 11():926-. [doi:10.3389/fmicb.2020.00926]32670207
2020Guzmán-Trampe, S, Ikeda, H, Vinuesa, P, Macías-Rubalcava, M, Esquivel, B, Centeno-Leija, S, Tapia-Cabrera, S, Mora-Herrera, S, Ruiz-Villafán, B, Rodríguez-Sanoja, R, Sanchez, S. (2020). "Production of distinct labdane-type diterpenoids using a novel cryptic labdane-like cluster from Streptomyces thermocarboxydus K155.". Applied Microbiology And Biotechnology. 104(2):741-750. [doi:10.1007/s00253-019-10240-3]31807886
2020López-Sámano, M, Beltrán, L, Sánchez-Thomas, R, Dávalos, A, Villaseñor, T, García-García, J, García-de los Santos, A. (2020). "A novel way to synthesize pantothenate in bacteria involves ß-alanine synthase present in uracil degradation pathway". MICROBIOLOGYOPEN. 9(4):e1006-. [doi:10.1002/mbo3.1006]32112625
2020Mejía-Almonte, C, Busby, S, Wade, J, van Helden, J, Arkin, A, Stormo, G, Eilbeck, K, Palsson, B, Galagan, J, Collado-Vides, J. (2020). "Redefining fundamental concepts of transcription initiation in bacteria". NATURE REVIEWS GENETICS. 21(11):699-714. [doi:10.1038/s41576-020-0254-8]32665585
2020Bañuelos-Vazquez, L, Castellani, L, Luchetti, A, Romero, D, Torres Tejerizo, G, Brom, S. (2020). "Role of plant compounds in the modulation of the conjugative transfer of pRet42a". Plos One. 15(8):238218-238218. [doi:10.1371/journal.pone.0238218]32845909
2020Aguirre, L, Salazar, J, Vásquez, J, García-Angulo, V. (2020). "Interdependency of regulatory effects of iron and riboflavin in the foodborne pathogen Shigella flexneri determined by integral transcriptomics". Peerj. 8():e9553-. [doi:10.7717/peerj.9553]32983629
2020Ortíz-Gamino, D, Gregorio, J, Cunha, L, Martínez-Romero, E, Fragoso, C, Ortíz-Ceballos, Á. (2020). "Population genetics and diversity structure of an invasive earthworm in tropical and temperate pastures from veracruz, mexico". Zookeys. 2020(941):49-69. [doi:10.3897/zookeys.941.49319]32595407
2020Rojas, E, Martinez-Pacheco, M, Rodriguez-Sastre, M, Ramos-Espinosa, P, Valverde, M. (2020). "Post-transcriptional regulation of Rad51c by miR-222 contributes cellular transformation.". Plos One. 15(1):e0221681-. [doi:10.1371/journal.pone.0221681]31923208
2020Altúzar-Molina, A, Lozano, L, Ortíz-Berrocal, M, Ramírez, M, Martínez, L, de Lourdes Velázquez-Hernández, M, Dhar-Ray, S, Silvente, S, Mariano, N, Shishkova, S, Hernández, G, Reddy, P. (2020). "Expression of the Legume-Specific Nod Factor Receptor Proteins Alters Developmental and Immune Responses in Rice". PLANT MOLECULAR BIOLOGY REPORTER. 38(2):262-281. [doi:10.1007/s11105-019-01188-9]
2020Barrios-Villa, E, Martínez de la Peña, C, Lozano-Zaraín, P, Cevallos, M, Torres, C, Torres, A, Rocha-Gracia, R. (2020). "Comparative genomics of a subset of Adherent/Invasive Escherichia coli strains isolated from individuals without inflammatory bowel disease.". Genomics. 112(2):1813-1820. [doi:10.1016/j.ygeno.2019.10.013]31689478
2020Giner-Lamia J, Vinuesa P, Betancor L, Silva C, Bisio J, Soleto L, Chabalgoity JA, Puente JL, Salmonella CYTED Network, García-Del Portillo F. (2020). "Correction to: Genome analysis of Salmonella enterica subsp. diarizonae isolates from invasive human infections reveals enrichment of virulence-related functions in lineage ST1256.". Bmc Genomics. 21(1):373-373. [doi:10.1186/s12864-020-06781-x]32456693
2020Cornejo-Juárez, P, Cevallos, M, Castro-Jaimes, S, Castillo-Ramìrez, S, Velázquez-Acosta, C, Martìnez-Oliva, D, Pérez-Oseguera, A, Rivera-Buendìa, F, Volkow-Fernández, P. (2020). "High mortality in an outbreak of multidrug resistant Acinetobacter baumannii infection introduced to an oncological hospital by a patient transferred from a general hospital.". Plos One. 15(7):e0234684-. [doi:10.1371/journal.pone.0234684]32702006
2020Cornejo-Páramo, P, Lira-Noriega, A, Ramírez-Suástegui, C, Méndez-De-La-Cruz, F, Székely, T, Urrutia, A, Cortez, D. (2020). "Sex determination systems in reptiles are related to ambient temperature but not to the level of climatic fluctuation.". Bmc Evolutionary Biology. 20(1):103-. [doi:10.1186/s12862-020-01671-y]32807071
2020Garcia-Angulo, V, Herve, B, Melo, J, Sanhueza, C, la Fuente, S, Aguirre, L, Baysdorfer, C, Ulloa, M. (2020). "Isolation and first draft genome sequence of a linezolid-dependent Staphylococcus aureus clinical strain". FUTURE MICROBIOLOGY. 15(12):1123-1129. [doi:10.2217/fmb-2020-0068]32954844
2020Gomez-Caudillo, L, Ortega-Lozano, A, Martinez-Batallar, A, Rosas-Vargas, H, Minauro-Sanmiguel, F, Encarnacion-Guevara, S. (2020). "Principal component analysis on LC-MS/MS and 2DE-MALDI-TOF in glioblastoma cell lines reveals that mitochondria act as organelle sensors of the metabolic state in glioblastoma.". ONCOLOGY REPORTS. 44(2):661-673. [doi:10.3892/or.2020.7625]32468038
2020Rizo, J, Rogel, M, Guillén, D, Wacher, C, Martinez-Romero, E, Encarnación, S, Sánchez, S, Rodríguez-Sanoja, R. (2020). "Nitrogen Fixation in Pozol, a Traditional Fermented Beverage.". Applied And Environmental Microbiology. 86(16):1-15. [doi:10.1128/AEM.00588-20]32503911
2020Pineda-Mora, D, Juárez-López, A, Toribio-Jiménez, J, Leal-Ascencio, M, Ruvalcaba-Ledezma, J, Castelán-Sánchez, H, Aguirre-Noyola, J, Arp, P. (2020). "Diversity and Functions of Epilithic Riverine Biofilms". WATER AIR AND SOIL POLLUTION. 231(8):391-. [doi:10.1007/s11270-020-04692-x]
2020Carballo-Ontiveros, M, Cazares, A, Vinuesa, P, Kameyama, L, Guarneros, G. (2020). "The Concerted Action of Two B3-Like Prophage Genes Excludes Superinfecting Bacteriophages by Blocking DNA Entry into pseudomonas Aeruginosa". JOURNAL OF VIROLOGY. 94(15):e00953-20-. [doi:10.1128/JVI.00953-20]32461312
2020Bañuelos-Vazquez, L, Cazares, D, Rodríguez, S, Cervantes-De La Luz, L, Sánchez-López, R, Castellani, L, Tejerizo, G, Brom, S. (2020). "Transfer of the Symbiotic Plasmid of Rhizobium etli CFN42 to Endophytic Bacteria Inside Nodules.". Frontiers in Microbiology. 11():1752-. [doi:10.3389/fmicb.2020.01752]32849381
2020Rodríguez-Beltrán, J, Sørum, V, Toll-Riera, M, de la Vega, C, Peña-Miller, R, Millán, Á. (2020). "Genetic dominance governs the evolution and spread of mobile genetic elements in bacteria.". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 117(27):15755-15762. [doi:10.1073/pnas.2001240117]32571917
2020Cevallos, M, Guerrero, G, Ríos, S, Arroyo, A, Villalobos, M, Porta, H. (2020). "The mitogenome of Pseudocrossidium replicatum, a desiccation-tolerant moss". MITOCHONDRIAL DNA PART B-RESOURCES. 5(3):2339-2341. [doi:10.1080/23802359.2020.1774436]33457783
2020Castillo-Ramírez, S, Mateo-Estrada, V, Gonzalez-Rocha, G, Opazo-Capurro, A. (2020). "Phylogeographical Analyses and Antibiotic Resistance Genes of Acinetobacter johnsonii Highlight Its Clinical Relevance". mSphere. 5(4):00581-. [doi:10.1128/mSphere.00581-20]32611704
2020de la Cruz, M, Ramírez, E, Sigala, J, Utrilla, J, Lara, A. (2020). "Plasmid DNA Production in Proteome-Reduced Escherichia coli .". Microorganisms. 8(9):1-8. [doi:10.3390/microorganisms8091444]32967123
2020Cuaxinque-Flores, G, Luis Aguirre-Noyola, J, Hernandez-Flores, G, Martinez-Romero, E, Romero-Ramirez, Y, Talavera-Mendoza, O. (2020). "Bioimmobilization of toxic metals by precipitation of carbonates using Sporosarcina luteola: An in vitro study and application to sulfide-bearing tailings". SCIENCE OF THE TOTAL ENVIRONMENT. 724():138124-. [doi:10.1016/j.scitotenv.2020.138124]32268286
2020Rebollar-Flores, J, Medina-Aparicio, L, Osio-Becerro, V, Villarreal, J, Mayo, S, Mendoza, B, Rodríguez-Gutierrez, S, Olvera, L, Dávila, S, Encarnación, S, Martínez-Batallar, A, Calva, E, Hernández-Lucas, I. (2020). "The Salmonella enterica Serovar Typhi ltrR Gene Encodes Two Proteins Whose Transcriptional Expression Is Upregulated by Alkaline pH and Repressed at Their Promoters and Coding Regions by H-NS and Lrp". Journal Of Bacteriology. 202(13):e00783-19-. [doi:10.1128/JB.00783-19]32284321
2020Garza-Lopez, E, Aldana, A, Darszon, A, Nishigaki, T, Lopez-Gonzalez, I. (2020). "Ca(V)3.1 channel pore pseudo-symmetry revealed by selectivity filter mutations in its domains I/II". Cell Calcium. 89():102214-. [doi:10.1016/j.ceca.2020.102214]32428730
2020Salgado-Camargo, A, Castro-Jaimes, S, Gutierrez-Rios, R, Lozano, L, Altamirano-Pacheco, L, Silva-Sanchez, J, Pérez-Oseguera, Á, Volkow, P, Castillo-Ramírez, S, Cevallos, M. (2020). "Structure and Evolution of Acinetobacter baumannii Plasmids". Frontiers in Microbiology. 11():1283-. [doi:10.3389/fmicb.2020.01283]32625185
2020Gutiérrez-Guerrero, Y, Ibarra-Laclette, E, Martínez Del Río, C, Barrera-Redondo, J, Rebollar, E, Ortega, J, León-Paniagua, L, Urrutia, A, Aguirre-Planter, E, Eguiarte, L. (2020). "Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats.". GigaScience. 9(6):giaa059-. [doi:10.1093/gigascience/giaa059]32510151
2020Bheda, P, Aguilar-Gómez, D, Becker, N, Becker, J, Stavrou, E, Kukhtevich, I, Höfer, T, Maerkl, S, Charvin, G, Marr, C, Kirmizis, A, Schneider, R. (2020). "Single-Cell Tracing Dissects Regulation of Maintenance and Inheritance of Transcriptional Reinduction Memory.". MOLECULAR CELL. 78(5):915-9257. [doi:10.1016/j.molcel.2020.04.016]32392469
2020Cornejo-Páramo, P, Dissanayake, D, Lira-Noriega, A, Martínez-Pacheco, M, Acosta, A, Ramírez-Suástegui, C, Méndez-de-la-Cruz, F, Székely, T, Urrutia, A, Georges, A, Cortez, D. (2020). "Viviparous Reptile Regarded to Have Temperature-Dependent Sex Determination Has Old XY Chromosomes.". Genome Biology And Evolution. 12(6):924-930. [doi:10.1093/gbe/evaa104]32433751
2020Singh, M, De Silva, P, Al-Saadi, Y, Switala, J, Loewen, P, Hausner, G, Chen, W, Hernandez, I, Castillo-Ramirez, S, Kumar, A. (2020). "Characterization of extremely drug-resistant and hypervirulent Acinetobacter baumannii ab030". ANTIBIOTICS-BASEL. 9(6):328-. [doi:10.3390/antibiotics9060328]32560407
2020Rebollar, E, Martínez-Ugalde, E, Orta, A. (2020). "The Amphibian Skin Microbiome and Its Protective Role Against Chytridiomycosis". Herpetologica. 76(2):167-177. [doi:10.1655/0018-0831-76.2.167]
2020Abad-Fitz, I, Maldonado-Almanza, B, Aguilar-Dorantes, K, Sánchez-Méndez, L, Gómez-Caudillo, L, Casas, A, Blancas, J, García-Rodríguez, Y, Beltrán-Rodríguez, L, Sierra-Huelsz, J, Cristians, S, Moreno-Calles, A, Torres-García, I, Espinosa-García, F. (2020). "Consequences of traditional management in the production and quality of Copal resin (Bursera bipinnata (Moc. & Sesse ex DC.) Engl.) in Mexico". Forests. 11(9):991-. [doi:10.3390/f11090991]
2020Dorcas Zúñiga-Silgado, Julio C Rivera-Leyva, Jeffrey J Coleman, Ayixon Sánchez-Reyez, Susana Valencia-Díaz, Mario Serrano, Luz E de-Bashan, Jorge L Folch-Mallol. (2020). "Soil Type Affects Organic Acid Production and Phosphorus Solubilization Efficiency Mediated by Several Native Fungal Strains from Mexico". Microorganisms. 8(9):1337-. [doi:10.3390/microorganisms8091337]32887277
2020Ide-Pérez, M, Fernández-López, M, Sánchez-Reyes, A, Leija, A, Batista-García, R, Folch-Mallol, J, Sánchez-Carbente, M. (2020). "Aromatic Hydrocarbon Removal by Novel Extremotolerant Exophiala and Rhodotorula Spp. from an Oil Polluted Site in Mexico". JOURNAL OF FUNGI. 6(3):1-17. [doi:10.3390/jof6030135]32823980
2020Pereira-Santana, A, Gamboa-Tuz, S, Zhao, T, Eric Schranz, M, Vinuesa, P, Bayona, A, Rodríguez-Zapata, L, Castano, E. (2020). "Fibrillarin evolution through the Tree of Life: Comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin.". Plos Computational Biology. 16(10):e1008318-. [doi:10.1371/journal.pcbi.1008318]33075080
2020Rodriguez, S, Correa-Galeote, D, Sanchez-Perez, M, Ramirez, M, Isidra-Arellano, M, Reyero-Saavedra, M, Zamorano-Sanchez, D, Hernandez, G, Valdes-Lopez, O, Girard, L. (2020). "A Novel OmpR-Type Response Regulator Controls Multiple Stages of the Rhizobium etli – Phaseolus vulgaris N2-Fixing Symbiosis". Frontiers in Microbiology. 11():615775-. [doi:10.3389/fmicb.2020.615775]33384681
2020Ángel Martín-Rodríguez, J, Ariani, A, Leija, A, Elizondo, A, Fuentes, S, Ramirez, M, Gepts, P, Hernández, G, Formey, D. (2020). "Phaseolus vulgaris MIR1511 genotypic variations differentially regulate plant tolerance to aluminum toxicity.". PLANT JOURNAL. ():-. [doi:10.1111/tpj.15129]33300202
2020Figueredo, M, Formey, D, Rodríguez, J, Ibáñez, F, Hernández, G, Fabra, A. (2020). "Identification of miRNAs linked to peanut nodule functional processes.". JOURNAL OF BIOSCIENCES. 45(1):62-. [doi:10.1007/s12038-020-00034-5]32385221
2020Martínez-Ortiz, I, Ahumada-Manuel, C, Hsueh, B, Guzmán, J, Moreno, S, Cocotl-Yañez, M, Waters, C, Zamorano-Sánchez, D, Espín, G, Núñeza, C. (2020). "Cyclic di-GMP-Mediated Regulation of Extracellular Mannuronan C-5 Epimerases Is Essential for Cyst Formation in Azotobacter Vinelandii.". Journal Of Bacteriology. 202(24):e00135-20-. [doi:10.1128/JB.00135-20]32989089
2020Taboada-Castro, H, Castro-Mondragón, J, Aguilar-Vera, A, Hernández-Álvarez, A, van Helden, J, Encarnación-Guevara, S. (2020). "RhizoBindingSites, a Database of DNA-Binding Motifs in Nitrogen-Fixing Bacteria Inferred Using a Footprint Discovery Approach.". Frontiers in Microbiology. 11():567471-. [doi:10.3389/fmicb.2020.567471]33250866
2020Martínez-Pacheco, M, Tenorio, M, Almonte, L, Fajardo, V, Godínez, A, Fernández, D, Cornejo-Páramo, P, Díaz-Barba, K, Halbert, J, Liechti, A, Székely, T, Urrutia, A, Cortez, D. (2020). "Expression Evolution of Ancestral XY Gametologs across All Major Groups of Placental Mammals.". Genome Biology And Evolution. 12(11):2015-2028. [doi:10.1093/gbe/evaa173]32790864
2020Tapia-García, E, Arroyo-Herrera, I, Rojas-Rojas, F, Ibarra, J, Vásquez-Murrieta, M, Martínez-Aguilar, L, López-Lara, I, Whitman, W, Estrada de los Santos, P. (2020). "Paraburkholderia lycopersici sp. nov., a nitrogen-fixing species isolated from rhizoplane of Lycopersicon esculentum Mill. var. Saladette in Mexico.". Systematic And Applied Microbiology. 43(6):126133-. [doi:10.1016/j.syapm.2020.126133]32998072
2020Mancilla-Rojano, J, Ochoa, S, Reyes-Grajeda, J, Flores, V, Medina-Contreras, O, Espinosa-Mazariego, K, Parra-Ortega, I, Rosa-Zamboni, D, Castellanos-Cruz, M, Arellano-Galindo, J, Cevallos, M, Hernández-Castro, R, Xicohtencatl-Cortes, J, Cruz-Córdova, A. (2020). "Molecular Epidemiology of Acinetobacter calcoaceticus - Acinetobacter baumannii Complex Isolated From Children at the Hospital Infantil de México Federico Gómez.". Frontiers in Microbiology. 11():576673-. [doi:10.3389/fmicb.2020.576673]33178158
2020De la Rosa, C, Lozano, L, Castillo-Ramírez, S, Covarrubias, A, Reyes, J. (2020). "Origin and Evolutionary Dynamics of the miR2119 and ADH1 Regulatory Module in Legumes.". Genome Biology And Evolution. 12(12):2355-2369. [doi:10.1093/gbe/evaa205]33045056
2020López-Leal, G, Santamaria, R, Cevallos, M, Gonzalez, V, Castillo-Ramírez, S. (2020). "Letter to the Editor: Prophages Encode Antibiotic Resistance Genes in Acinetobacter baumannii .". MICROBIAL DRUG RESISTANCE. 26(10):1275-1277. [doi:10.1089/mdr.2019.0362]32109174
2020Rojas-Solis, D, Vences-Guzmán, M, Sohlenkamp, C, Santoyo, G. (2020). "Antifungal and Plant Growth-Promoting Bacillus under Saline Stress Modify their Membrane Composition". JOURNAL OF SOIL SCIENCE AND PLANT NUTRITION. 20(3):1549-1559. [doi:10.1007/s42729-020-00246-6]
2020Sánchez-Pérez, B, Zenteno-Rojas, A, Rincón-Molina, C, Ruíz-Valdiviezo, V, Gutiérrez-Miceli, F, Vences-Guzmán, M, Villalobos-Maldonado, J, Rincón-Rosales, R. (2020). "Rhizosphere and Endophytic Bacteria Associated to Ocimum basilicum L. with Decaclorobiphenyl Removal Potential". WATER AIR AND SOIL POLLUTION. 231(3):134-. [doi:10.1007/s11270-020-04481-6]
2020Wu, D, Zamorano-Sánchez, D, Pagliai, F, Park, J, Floyd, K, Lee, C, Kitts, G, Rose, C, Bilotta, E, Wong, G, Yildiz, F. (2020). "Reciprocal c-di-GMP signaling: Incomplete flagellum biogenesis triggers c-di-GMP signaling pathways that promote biofilm formation.". Plos Genetics. 16(3):e1008703-. [doi:10.1371/journal.pgen.1008703]32176702
2020Escorcia-Rodríguez, J, Tauch, A, Freyre-González, J. (2020). "Abasy Atlas v2.2: The most comprehensive and up-to-date inventory of meta-curated, historical, bacterial regulatory networks, their completeness and system-level characterization.". Computational and Structural Biotechnology Journal. 18():1228-1237. [doi:10.1016/j.csbj.2020.05.015]32542109
2020Montes-Grajales, D, Puerta-Guardo, H, Espinosa, D, Harris, E, Caicedo-Torres, W, Olivero-Verbel, J, Martínez-Romero, E. (2020). "In Silico drug repurposing for the identification of potential candidate molecules against arboviruses infection.". ANTIVIRAL RESEARCH. 173():104668-. [doi:10.1016/j.antiviral.2019.104668]31786251
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2007Caballero-Mellado, J, Onofre-Lemus, J, Estrada-de los Santos, P, Martinez-Aguilar, L. (2007). "The tomato rhizosphere, an environment rich in nitrogen-fixing Burkholderia species with capabilities of interest for agriculture and bioremediation". Applied And Environmental Microbiology. 73(16):5308-5319. [doi:10.1128/AEM.00324-07]17601817
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2007Garza-Ramos, U, Martinez-Romero, E, Silva-Sanchez, J. (2007). "SHV-type extended-spectrum ß-lactamase (ESBL) are encoded in related plasmids from enterobacteria clinical isolates from Mexico". Salud Publica De Mexico. 49(6):415-421. [doi:10.1590/S0036-36342007000600008]18176701
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2007Peralta Díaz, H. (2007). "Azospirillum, micorrizas y Rhizobium. Biofertilizantes microbianos para la agricultura sustentable". Agricultura sustentable y biofertilizantes. 1():118-129.
2007Silva Romero, C, Vinuesa Fleischmann, P. (2007). "Ecología evolutiva de bacterias y el concepto de especie: el caso de los rizobios". Ecología Molecular. ():351-392.
2007Janga, S. (2007). "Prediction and evolution of transcription factors and their evolutionary families in prokaryotes". Bmc Systems Biology. 1():P3-. [doi:10.1186/1752-0509-1-S1-P3]
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2007Silva Romero, C, Kan, F, Martínez Romero, M. (2007). "Population genetic structure of Sinorhizobium meliloti and S. medicae isolated from nodules of Medicago spp. in Mexico". Fems Microbiology Ecology. 60(3):477-489. [doi:10.1111/j.1574-6941.2007.00301.x]17386032
2007Lloret y Sánchez, L, Ormeño Orrillo, E, Rincón, R, Martínez Romero, J, Rogel Hernández, M, Martínez Romero, M. (2007). "Ensifer mexicanus sp. nov. a new species nodulating Acacia angustissima (Mill.) Kuntze in Mexico". Systematic And Applied Microbiology. 30(4):280-290. [doi:10.1016/j.syapm.2006.12.002]17293074
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2007Contreras Moreira, B, Fernández, P, Collado Vides, P. (2007). "TFmodeller: Comparative modelling of protein-DNA complexes". Bioinformatics. 23(13):1694-1696. [doi:10.1093/bioinformatics/btm148]17459960
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2006Martínez Antonio, A, Janga, S, Salgado Osorio, H, Collado Vides, P. (2006). "Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli". TRENDS IN MICROBIOLOGY. 14(1):22-27. [doi:10.1016/j.tim.2005.11.002]16311037
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2006Salgado Osorio, H, Santos Zavaleta, A, Gama Castro, M, Peralta Gil, M, Peñaloza Spinola, M, Martínez Antonio, A, Karp, P, Collado Vides, P. (2006). "The comprehensive updated regulatory network of Escherichia coli K-12". Bmc Bioinformatics. 7():5-5. [doi:10.1186/1471-2105-7-5]16398937
2006González Zúñiga, V, Santamaria Gutiérrez, R, Bustos Arcos, V, Hernández González, I, Medrano Soto, L, Moreno Hagelsieb, G, Janga, S, Ramírez Romero, M, Jiménez Jacinto, V, Collado Vides, P, Dávila Ramos, J. (2006). "The partitioned Rhizobium etli genome: Genetic and metabolic redundancy in seven interacting replicons". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 103(10):3834-3839. [doi:10.1073/pnas.0508502103]16505379
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2006Cabrera-Valladares, N, Richardson, A, Olvera, C, Trevino, L, Deziel, E, Lepine, F, Soberon-Chavez, G. (2006). "Monorhamnolipids and 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs) production using Escherichia coli as a heterologous host". Applied Microbiology And Biotechnology. 73(1):187-194. [doi:10.1007/s00253-006-0468-5]16847602
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2006Menna, P, Hungria, M, Barcellos, F, Bangel, E, Hess, P, Martínez Romero, M. (2006). "Molecular phylogeny based on the 16S rRNA gene of elite rhizobial strains used in Brazilian commercial inoculants". Systematic And Applied Microbiology. 29(4):315-332. [doi:10.1016/j.syapm.2005.12.002]16442259
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2006Santos-Zavaleta, A, Salgado, H, Gama-Castro, S, Peralta-Gil, M, Contreras-Moreira, B, Penaloza-Spinola, M, Collado-Vides, J. (2006). "RegulonDB. The most important database in transcriptional regulatory network, operon organization, and growth conditions of Escherichia coli K12". Proceedings Of The Fifth International Conference On Bioinformatics Of Genome Regulation And Structure, Vol 3. ():323-323.
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2006Huerta Moreno, A, Francino, M, Morett Sánchez, J, Collado Vides, P. (2006). "Selection for unequal densities of s70promoter-like signals in different regions of large bacterial genomes". Plos Genetics. 2(11):1740-1750. [doi:10.1371/journal.pgen.0020185]17096598
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2006Rogel Hernández, M, Torres, C, Lloret y Sánchez, L, Rosenblueth Laguette, M, Hernández-Lucas, I, Martínez Aguilar, L, Martínez Salazar, J, Martínez Romero, M. (2006). "Lateral transfer of Rhizobium symbiotic plasmids leading to genomic innovation". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5():310-318.
2006Martinez-Romero, E. (2006). "Dinitrogen-Fixing Prokaryotes". Prokaryotes: A Handbook On The Biology Of Bacteria, Vol 2, Third Edition. ():793-817. [doi:10.1007/0-387-30742-7_24]
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2006Ormeño Orrillo, E, Vinuesa Fleischmann, P, Zuniga-Davila, D, Martínez Romero, M. (2006). "Molecular diversity of native bradyrhizobia isolated from Lima bean (Phaseolus lunatus L.) in Peru". Systematic And Applied Microbiology. 29(3):253-262. [doi:10.1016/j.syapm.2005.09.002]16564961
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2006Velasco-Garcia, R, Villalobos, M, Ramirez-Romero, M, Mujica-Jimenez, C, Iturriaga, G, Munoz-Clares, R. (2006). "Betaine aldehyde dehydrogenase from pseudomonas Aeruginosa: cloning, over-expression in Escherichia coli, and regulation by choline and salt". Archives Of Microbiology. 185(1):14-22. [doi:10.1007/s00203-005-0054-8]16315011
2006Albino, U, Saridakis, D, Ferreira, M, Hungria, M, Vinuesa, P, Andrade, G. (2006). "High diversity of diazotrophic bacteria associated with the carnivorous plant Drosera villosa var. villosa growing in oligotrophic habitats in Brazil". PLANT AND SOIL. 287(1-2):199-207. [doi:10.1007/s11104-006-9066-7]
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2006Sreevidya, V, Rao, C, Sullia, S, Ladha, J, Reddy, P. (2006). "Metabolic engineering of rice with soybean isoflavone synthase for promoting nodulation gene expression in Rhizobia". Journal Of Experimental Botany. 57(9):1957-1969. [doi:10.1093/jxb/erj143]16690627
2006Batista, C, D'Suze, G, Gomez-Lagunas, F, Zamudio, F, Encamacion, S, Sevcik, C, Possani, L. (2006). "Proteomic analysis of Tityus discrepans scorpion venom and amino acid sequence of novel toxins". Proteomics. 6(12):3718-3727. [doi:10.1002/pmic.200500525]16705749
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2006Marin-Cevada, V, Vargas, V, Juarez, M, Lopez, V, Zagada, G, Hernandez, S, Cruz, A, Caballero-Mellado, J, Lopez-Reyes, L, Jimenez-Salgado, T, Carcano-Montiel, M, Fuentes-Ramirez, L. (2006). "Presence of Pantoea Citrea, causal agent of pink disease, in pineapple fields in Mexico". PLANT PATHOLOGY. 55(2):294-294. [doi:10.1111/j.1365-3059.2005.01331.x]
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2005Lopez-Lara, I, Gao, J, Soto, M, Solares-Perez, A, Weissenmayer, B, Sohlenkamp, C, Verroios, G, Thomas-Oates, J, Geiger, O. (2005). "Phosphorus-free membrane lipids of Sinorhizobium meliloti are not required for the symbiosis with alfalfa but contribute to increased cell yields under phosphorus-limiting conditions of growth". Molecular Plant-Microbe Interactions. 18(9):973-982. [doi:10.1094/MPMI-18-0973]16167767
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2003Tun-Garrido, C, Bustos, P, Gonzalez, V, Brom, S. (2003). "Conjugative transfer of p42a from Rhizobium etli CFN42, which is required for mobilization of the symbiotic plasmid, is regulated by quorum sensing". Journal Of Bacteriology. 185(5):1681-1692. [doi:10.1128/JB.185.5.1681-1692.2003]12591886
2003Suarez, R, Marquez, J, Shishkova, S, Hernandez, G. (2003). "Overexpression of alfalfa cytosolic glutamine synthetase in nodules and flowers of transgenic Lotus japonicus plants". Physiologia Plantarum. 117(3):326-336. [doi:10.1034/j.1399-3054.2003.00053.x]12654032
2003Guo, X, Flores, M, Mavingui, P, Fuentes, S, Hernandez, G, Davila, G, Palacios, R. (2003). "Natural genomic design in Sinorhizobium meliloti novel genomic architectures". GENOME RESEARCH. 13(8):1810-1817. [doi:10.1101/gr.1260903]12902376
2003Silva, C, Vinuesa, P, Eguiarte, L, Martinez-Romero, E, Souza, V. (2003). "Rhizobium etli and Rhizobium gallicum nodulate common bean (Phaseolus vulgaris) in a traditionally managed milpa plot in Mexico: Population genetics and biogeographic implications". Applied And Environmental Microbiology. 69(2):884-893. [doi:10.1128/AEM.69.2.884-893.2003]12571008
2003Silvente, S, Camas, A, Lara Flores, M. (2003). "Heterogeneity of sucrose synthase genes in bean (Phaseolus vulgaris L.): evidence for a nodule-enhanced sucrose synthase gene". Journal Of Experimental Botany. 54(383):749-755. [doi:10.1097/jxb/erg086]12554718
2003Wang, E, Kan, F, Tan, Z, Toledo García, I, Chen, W, Martínez Romero, M. (2003). "Diverse Mesorhizobium plurifarium populations native to Mexican soils". Archives Of Microbiology. 180(6):444-454. [doi:10.1007/s00203-003-0610-z]14576977
2003Jahn, O, Davila, G, Romero, D, Noel, K. (2003). "BacS: An abundant bacteroid protein in Rhizobium etli whose expression ex planta requires nifA". Molecular Plant-Microbe Interactions. 16(1):65-73. [doi:10.1094/MPMI.2003.16.1.65]12580283
2003Martínez Antonio, A, Salgado Osorio, H, Gama Castro, M, Gutiérrez Ríos, R, Jiménez Jacinto, V, Collado Vides, P. (2003). "Environmental Conditions and Transcriptional Regulation in Escherichia coli: A Physiological Integrative Approach". BIOTECHNOLOGY AND BIOENGINEERING. 84(7):743-749. [doi:10.1002/bit.10846]14708114
2003Romero, D, Zertuche, F. (2003). "The asymptotic number of attractors in the random map model". JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL. 36(13):3691-3700. [doi:10.1088/0305-4470/36/13/304]
2003Valderrama, B, Oliver, P, Medrano-Soto, A, Vazquez-Duhalt, R. (2003). "Evolutionary and structural diversity of fungal laccases". Antonie Van Leeuwenhoek International Journal of General and Molecular; Microbiology. 84(4):289-299. [doi:10.1023/A:1026070122451]14574106
2003Sohlenkamp, C, Lopez-Lara, I, Geiger, O. (2003). "Biosynthesis of phosphatidylcholine in bacteria". Progress In Lipid Research. 42(2):115-162. [doi:10.1016/S0163-7827(02)00050-4]12547654
2003Cordoba, E, Shishkova, S, Vance, C, Hernandez, G. (2003). "Antisense inhibition of NADH glutamate synthase impairs carbon/nitrogen assimilation in nodules of alfalfa (Medicago sativa L.)". PLANT JOURNAL. 33(6):1037-1049. [doi:10.1046/j.1365-313X.2003.01686.x]12631328
2003Martinez, L, Caballero-Mellaod, J, Orozco, J, Martinez-Romero, E. (2003). "Diazotrophic bacteria associated with banana (Musa spp.)". PLANT AND SOIL. 257(1):35-47. [doi:10.1023/A:1026283311770]
2003Munoz-Rojas, J, Caballero-Mellado, J. (2003). "Population dynamics of Gluconacetobacter diazotrophicus in sugarcane cultivars and its effect on plant growth". Microbial Ecology. 46(4):454-464. [doi:10.1007/s00248-003-0110-3]14722690
2003Young, J, Kuykendall, L, Martínez Romero, M, Kerr, A, Sawada, H. (2003). "Classification and nomenclature of Agrobacterium and Rhizobium - A reply to Farrand et al. (2003)". International Journal Of Systematic And Evolutionary Microbiology. 53(5):1689-1695. [doi:10.1099/ijs.0.02762-0]13130069
2003Uhde-Stone, C, Zinn, K, Ramirez-Yanez, M, Li, A, Vance, C, Allan, D. (2003). "Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency". Plant Physiology. 131(3):1064-1079. [doi:10.1104/pp.102.016881]12644659
2003Toledo García, I, Lloret y Sánchez, L, Martínez Romero, M. (2003). "Sinorhizobium americanus sp. nov., a New Sinorhizobium species nodulating native Acacia spp. in Mexico". Systematic And Applied Microbiology. 26(1):54-64. [doi:10.1078/072320203322337317]12747410
2003Snoeck, C, Verreth, C, Hernández Lucas, I, Martínez Romero, M, Vanderleyden, J. (2003). "Identification of a third sulfate activation system in Sinorhizobium sp. strain BR816: The CysDN sulfate activation complex". Applied And Environmental Microbiology. 69(4):2006-2014. [doi:10.1128/AEM.69.4.2006-2014.2003]12676676
2003Willems, A, Fernandez-Lopez, M, Munoz-Adelantado, E, Goris, J, De Vos, P, Martínez Romero, M, Toro, N, Gillis, M. (2003). "Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion". International Journal Of Systematic And Evolutionary Microbiology. 53(4):1207-1217. [doi:10.1099/ijs.0.02264-0]12892151
2003González Zúñiga, V, Bustos Arcos, V, Ramírez Romero, M, Medrano Soto, L, Salgado Osorio, H, Hernández González, I, Hernández Celis, J, Quintero Hernández, V, Moreno Hagelsieb, G, Girard Cuesy, M, Rodríguez Sánchez, O, Flores López, M, Cevallos Gaos, M, Collado Vides, P, Romero Camarena, D, Dávila Ramos, J. (2003). "The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments.". Genome Biology. 4(6):R36-. [doi:10.1186/gb-2003-4-6-r36]12801410
2003Desnoues, N, Lin, M, Guo, X, Ma, L, Carreno-Lopez, R, Elmerich, C. (2003). "Nitrogen fixation genetics and regulation in a pseudomonas Stutzeri strain associated with rice". MICROBIOLOGY-SGM. 149(8):2251-2262. [doi:10.1099/mic.0.26270-0]12904565
2003Collado Vides, P, Medrano Soto, L, Tusié-Luna, M. (2003). "With the finished human genome in hand, what next?". Genome Biology. 4(7):328-328. [doi:10.1186/gb-2003-4-7-328]12844356
2003Djordjevic, M, Chen, H, Natera, S, Van Noorden, G, Menzel, C, Taylor, S, Renard, C, Geiger, O, Weiller, G. (2003). "A global analysis of protein expression profiles in Sinorhizobium meliloti: Discovery of new genes for nodule occupancy and stress adaptation". Molecular Plant-Microbe Interactions. 16(6):508-524. [doi:10.1094/MPMI.2003.16.6.508]12795377
2003Perret, X, Kobayashi, H, Collado Vides, P. (2003). "Regulation of expression of symbiotic genes in Rhizobium sp. NGR234". INDIAN JOURNAL OF EXPERIMENTAL BIOLOGY. 41(10):1101-1113. 15242276
2003Huerta, A, Collado-Vides, J. (2003). "Sigma70 promoters in Escherichia coli: Specific transcription in dense regions of overlapping promoter-like signals". Journal Of Molecular Biology. 333(2):261-278. [doi:10.1016/j.jmb.2003.07.017]14529615
2003Jauregui, R, Abreu-Goodger, C, Moreno-Hagelsieb, G, Collado-Vides, J, Merino, E. (2003). "Conservation of DNA curvature signals in regulatory regions of prokaryotic genes". Nucleic Acids Research. 31(23):6770-6777. [doi:10.1093/nar/gkg882]14627810
2003Vinuesa Fleischmann, P, Neumann-Silkow, F, Pacios-Bras, C, Spaink, H, Martínez Romero, M, Werner, D. (2003). "Genetic analysis of a pH-regulated operon from Rhizobium tropici CIAT899 involved in acid tolerance and nodulation competitiveness". Molecular Plant-Microbe Interactions. 16(2):159-168. [doi:10.1094/MPMI.2003.16.2.159]12575750
2003Martinez-Antonio, A, Collado-Vides, J. (2003). "Identifying global regulators in transcriptional regulatory networks in bacteria". Current Opinion In Microbiology. 6(5):482-489. [doi:10.1016/j.mib.2003.09.002]14572541
2003Martinez-Morales, F, Schobert, M, Lopez-Lara, I, Geiger, O. (2003). "Pathways for phosphatidylcholine biosynthesis in bacteria". MICROBIOLOGY-SGM. 149(12):3461-3471. [doi:10.1099/mic.0.26522-0]14663079
2003Valencia-Cantero, E, Pena-Cabriales, J, Martinez-Romero, E. (2003). "The corrosion effects of sulfate- and ferric-reducing bacterial consortia on steel". GEOMICROBIOLOGY JOURNAL. 20(2):157-169. [doi:10.1080/01490450390193264]
2002Cevallos, M, Porta, H, Izquierdo, J, Tun-Garrido, C, Garcia-de-los-Santos, A, Davila, G, Brom, S. (2002). "Rhizobium etli CFN42 contains at least three plasmids of the repABC family: A structural and evolutionary analysis". Plasmid. 48(2):104-116. [doi:10.1016/S0147-619X(02)00119-1]12383728
2002Collado-Vides, J, Moreno-Hagelsieb, G, Medrano-Soto, A. (2002). "Microbial computational genomics of gene regulation". PURE AND APPLIED CHEMISTRY. 74(6):899-905. [doi:10.1351/pac200274060899]
2002Collado Vides, P, Moreno Hagelsieb, G, Pérez Rueda, E, Salgado Osorio, H, Huerta Moreno, A, Gutiérrez Ríos, R, Rosenblueth, D, Christen, A, Benítez Bellón, E, Medrano Soto, L, Gama Castro, M, Santos Zavaleta, A, Bonavides Martínez, C, DíPeredo, E, Sánchez Solano, E, Millá, D. (2002). "Genomics of Gene Regulation: The view from Escherichia coli". Gene Regulation and Metabolism, Post-Genomic Computational Approaches. ():103-128.
2002Moreno Hagelsieb, G, Collado Vides, P. (2002). "A powerful non-homology method for the prediction of operons in prokaryotes.". Bioinformatics. 18 Suppl 1():329-336. [doi:10.1093/bioinformatics/18.suppl_1.s329]12169563
2002Wang, E, Rogel Hernández, M, Sui, X, Chen, W, Martínez Romero, M, van Berkum, P. (2002). "Mesorhizobium amorphae, a rhizobial species that nodulates Amorpha fruticosa, is native to American soils". Archives Of Microbiology. 178(4):301-305. [doi:10.1007/s00203-002-0448-9]12209264
2002Wang, E, Tan, Z, Willems, A, Fernandez-Lopez, M, Reinhold-Hurek, B, Martínez Romero, M. (2002). "Sinorhizobium morelense sp. nov., a Leucaena leucocephala-associated bacterium that is highly resistant to multiple antibiotics". International Journal Of Systematic And Evolutionary Microbiology. 52(5):1687-1693. [doi:10.1099/ijs.0.01954-0]12361275
2002Moreno Hagelsieb, G, Collado Vides, P. (2002). "Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context". In Silico Biology: Journal of Biological Systems Modeling and Multi-Scale Simulation. 2(2):87-95. 12066843
2002Lira-Ruan, V, Ross, E, Sarath, G, Klucas, R, Arredondo-Peter, R. (2002). "Mapping and analysis of a hemoglobin gene family from Oryza sativa". PLANT PHYSIOLOGY AND BIOCHEMISTRY. 40(3):199-202. [doi:10.1016/S0981-9428(02)01365-7]
2002Silvente Keller, S, Blanco López, M, Camas, A, Ortega, J, Ramírez Yáñez, M, Lara Flores, M. (2002). "Rhizobium etli mutant modulates carbon and nitrogen metabolism in Phaseolus vulgaris nodules". Molecular Plant-Microbe Interactions. 15(7):728-733. [doi:10.1094/MPMI.2002.15.7.728]12118889
2002Geiger, O, López Lara, I. (2002). "Rhizobial acyl carrier proteins and their roles in the formation of bacterial cell-surface components that are required for the development of nitrogen-fixing root nodules on legume hosts". Fems Microbiology Letters. 208(2):153-162. [doi:10.1016/S0378-1097(02)00478-0]11959430
2002Ramírez Alfonsín, J, Romero, D. (2002). "Embeddability of the combinohedron". DISCRETE MATH. 254(1-3):473-483. [doi:10.1016/S0012-365X(01)00298-9]
2002Benítez Bellón, E, Moreno Hagelsieb, G, Collado Vides, P. (2002). "Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA.". Genome Biology. 3(3):RESEARCH0013-. 11897025
2002Acosta-Durán, C, Martínez Romero, M. (2002). "Diversity of Rhizobia from nodules of the leguminous tree Gliricidia sepium, a natural host of Rhizobium tropici". Archives Of Microbiology. 178(2):161-164. [doi:10.1007/s00203-002-0433-3]12115061
2002Brom Klanner, S, Girard Cuesy, M, García de los Santos, A, Sanjuan-Pinilla, J, Olivares, J, Sanjuan, J. (2002). "Conservation of plasmid-encoded traits among bean-nodulating Rhizobium species". Applied And Environmental Microbiology. 68(5):2555-2561. [doi:10.1128/AEM.68.5.2555-2561.2002]11976134
2002Degrave, W, Vargas, R, Alvarez, F, Collado Vides, P, Nunez, L, Ramirez, J, Grau, O. (2002). "Towards a bioinformatics network for Latin America and the Caribbean (LACBioNet).". Applied Bioinformatics. 1(1):53-56. 15130857
2002Karp, P, Riley, M, Saier, M, Paulsen, I, Collado-Vides, J, Paley, S, Pellegrini-Toole, A, Bonavides, C, Gama-Castro, S. (2002). "The EcoCyc database". Nucleic Acids Research. 30(1):56-58. [doi:10.1093/nar/30.1.56]11752253
2002Garcia-de los Santos, A, Morales, A, Baldoma, L, Clark, S, Brom, S, Yost, C, Hernandez-Lucas, I, Aguilar, J, Hynes, M. (2002). "The glcB locus of Rhizobium leguminosarum VF39 encodes an arabinose-inducible malate synthase". Canadian Journal Of Microbiology. 48(10):922-932. [doi:10.1139/w02-091]12489782
2002de Daruvar, A, Collado-Vides, J, Valencia, A. (2002). "Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus Subtilis". Journal Of Molecular Evolution. 55(2):211-221. [doi:10.1007/s00239-002-2317-1]12107597
2002del Río G., Santamaria Gutiérrez, R, Díaz M.L., Soberón Mainero, X, López-Munguía, A. (2002). "Novel and potential applications of alpha-amylases in the food industry". Engineering and Food for the 21st Century. ():913-925.
2002Dunn, M, Araiza, G, Encarnacion, S, del Vargas, M, Mora, J. (2002). "Effect of aniA (carbon flux regulator) and phaC (poly-ß-hydroxybutyrate synthase) mutations on pyruvate metabolism in Rhizobium etli". Journal Of Bacteriology. 184(8):2296-2299. [doi:10.1128/JB.184.8.2296-2299.2002]11914362
2002Encarnacion, S, del Vargas, M, Dunn, M, Davalos, A, Mendoza, G, Mora, Y, Mora, J. (2002). "aniA regulates reserve polymer accumulation and global protein expression in Rhizobium etli". Journal Of Bacteriology. 184(8):2287-2295. [doi:10.1128/JB.184.8.2287-2295.2002]11914361
2002Camas, A, Cardenas, L, Quinto, C, Lara Flores, M. (2002). "Expression of different calmodulin genes in bean (Phaseolus vulgaris L.): Role of nod factor on calmodulin gene regulation". Molecular Plant-Microbe Interactions. 15(5):428-436. [doi:10.1094/MPMI.2002.15.5.428]12036273
2002Tellez-Sosa, J, Soberon, N, Vega-Segura, A, Torres-Marquez, M, Cevallos, M. (2002). "The Rhizobium etli cyaC product: Characterization of a novel adenylate cyclase class". Journal Of Bacteriology. 184(13):3560-3568. [doi:10.1128/JB.184.13.3560-3568.2002]12057950
2002Mavingui, P, Flores, M, Guo, X, Davila, G, Perret, X, Broughton, W, Palacios, R. (2002). "Dynamics of genome architecture in Rhizobium sp strain NGR234". Journal Of Bacteriology. 184(1):171-176. [doi:10.1128/JB.184.1.171-176.2002]11741857
2002Sohlenkamp, C, Wood, C, Roeb, G, Udvardi, M. (2002). "Characterization of Arabidopsis AtAMT2, a high-affinity ammonium transporter of the plasma membrane". Plant Physiology. 130(4):1788-1796. [doi:10.1104/pp.008599]12481062
2002Huerta, A, Glasner, J, Gutierrez-Rios, R, Blattner, F, Collado-Vides, J. (2002). "GETools: gene expression tool for analysis of transcriptome experiments in E. coli". TRENDS IN GENETICS. 18(4):217-218. [doi:10.1016/S0168-9525(01)02620-8]
2002Hernandez-Lucas, I, Mavingui, P, Finan, T, Chain, P, Martinez-Romero, E. (2002). "in vivo cloning strategy for Rhizobium plasmids". Biotechniques. 33(4):782-788. [doi:10.2144/02334st01]12398186
2002Quintero, V, Cevallos, M, Davila, G. (2002). "A site-specific recombinase (RinQ) is required to exert incompatibility towards the symbiotic plasmid of Rhizobium etli". Molecular Microbiology. 46(4):1023-1032. [doi:10.1046/j.1365-2958.2002.03205.x]12421308
2002Collado-Vides, J, Moreno-Hagelsieb, G, Medrano-Soto, A. (2002). "Microbial computational genomics of gene regulation". PURE AND APPLIED CHEMISTRY. 74(6):899-905. [doi:10.1351/pac200274060899]
2002Weissenmayer, B, Gao, J, Lopez-Lara, I, Geiger, O. (2002). "Identification of a gene required for the biosynthesis of ornithine-derived lipids". Molecular Microbiology. 45(3):721-733. [doi:10.1046/j.1365-2958.2002.03043.x]12139618
2002Estrada, P, Mavingui, P, Cournoyer, B, Fontaine, F, Balandreau, J, Caballero-Mellado, J. (2002). "A N-2-fixing endophytic Burkholderia sp associated with maize plants cultivated in Mexico". Canadian Journal Of Microbiology. 48(4):285-294. [doi:10.1139/w02-023]12030700
2002Castillo, P, Zamilpa, A, Marquez, J, Hernandez, G, Lara Flores, M, Alvarez, L. (2002). "Comparative study of differentiation levels and valepotriate content of in vitro cultures and regenerated and wild plants of Valeriana edulis ssp procera". JOURNAL OF NATURAL PRODUCTS. 65(4):573-575. [doi:10.1021/np0104267]11975504
2002Sessitsch, A, Howieson, J, Perret, X, Antoun, H, Martinez-Romero, E. (2002). "Advances in Rhizobium research". CRITICAL REVIEWS IN PLANT SCIENCES. 21(4):323-378. [doi:10.1080/0735-260291044278]
2002Falcon, L, Escobar-Briones, E, Romero, D. (2002). "Nitrogen fixation patterns displayed by cyanobacterial consortia in Alchichica crater-lake, Mexico". Hydrobiologia. 467(1-3):71-78. [doi:10.1023/A:1014984629985]
2001López, O, Morera, C, Miranda-Ríos, J, Girard Cuesy, M, Romero Camarena, D, Soberón Chávez, M. (2001). "Regulation of gene expression in response to oxygen in Rhizobium etli: Role of FnrN in fixNOQP expression and in symbiotic nitrogen fixation". Journal Of Bacteriology. 183(24):6999-7006. [doi:10.1128/JB.183.24.6999-7006.2001]11717256
2001Wang, E, Martínez Romero, J, López Lara, I. (2001). "Rhizobium y su destacada simbiosis con plantas". Microbios en Línea. ():-.
2001Ross, E, Shearman, L, Mathiesen, M, Zhou, Y, Arredondo-Peter, R, Sarath, G, Klucas, R. (2001). "Nonsymbiotic hemoglobins in rice are synthesized during germination and in differentiating cell types". Protoplasma. 218(3-4):125-133. [doi:10.1007/BF01306602]11770429
2001Hershberg, R, Bejerano, G, Santos-Zavaleta, A, Margalit, H. (2001). "PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites". Nucleic Acids Research. 29(1):277-277. [doi:10.1093/nar/29.1.277]11125111
2001Pérez-Rueda, E, Collado-Vides, J. (2001). "Common history at the origin of the position - Function correlation in transcriptional regulators in archaea and bacteria". Journal Of Molecular Evolution. 53(3):172-179. [doi:10.1007/s002390010207]11523004
2001Lira Ruan, V, Sarath, G, Klucas, R, Arredondo Peter, J. (2001). "Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions". Plant Science. 161(2):279-287. [doi:10.1016/S0168-9452(01)00411-3]11448759
2001Ramírez-Benítez, M, Moreno-Hagelsieb, G, Almagro, J. (2001). "VIR.II: a new interface with the antibody sequences in the Kabat database". Biosystems. 61(2-3):125-131. [doi:10.1016/S0303-2647(01)00166-6]11716972
2001Tan, K, Moreno Hagelsieb, G, Collado Vides, P, Stormo, G. (2001). "A comparative genomics approach to prediction of new members of regulons". GENOME RESEARCH. 11(4):566-584. [doi:10.1101/gr.149301]11282972
2001Díaz-Leal, H, Martínez-Bernal, J, Romero, D. (2001). "Dimension of the fixed point set of a nilpotent endomorphism on the flag variety". BOL SOC MAT MEX. 7(1):23-33.
2001Rogel Hernández, M, Hernández Lucas, I, Kuykendall, L, Balkwill, D, Martínez Romero, M. (2001). "Nitrogen-Fixing Nodules with Ensifer adhaerens Harboring Rhizobium tropici Symbiotic Plasmids". Applied And Environmental Microbiology. 67(7):3264-3268. [doi:10.1128/AEM.67.7.3264-3268.2001]11425750
2001Gandara, B, Merino, A, Rogel Hernández, M, Martínez Romero, M. (2001). "Limited genetic diversity of Brucella spp.". JOURNAL OF CLINICAL MICROBIOLOGY. 39(1):235-240. [doi:10.1128/JCM.39.1.235-240.2001]11136777
2001Dunn, M, Araiza, G, Finan, T. (2001). "Cloning and characterization of the pyruvate carboxylase from Sinorhizobium meliloti Rm1021". Archives Of Microbiology. 176(5):355-363. [doi:10.1007/s002030100336]11702077
2001Chichkova, S, Arellano, J, Vance, C, Hernandez, G. (2001). "Transgenic tobacco plants that overexpress alfalfa NADH-glutamate synthase have higher carbon and nitrogen content". Journal Of Experimental Botany. 52(364):2079-2087. [doi:10.1093/jexbot/52.364.2079]11604446
2001Lopez-Lara, I, Geiger, O. (2001). "Novel pathway for phosphatidylcholine biosynthesis in bacteria associated with eukaryotes". JOURNAL OF BIOTECHNOLOGY. 91(2-3):211-221. [doi:10.1016/S0168-1656(01)00331-5]11566392
2001Fuentes, S, Allen, D, Ortiz-Lopez, A, Hernandez, G. (2001). "Over-expression of cytosolic glutamine synthetase increases photosynthesis and growth at low nitrogen concentrations". Journal Of Experimental Botany. 52(358):1071-1081. [doi:10.1093/jexbot/52.358.1071]11432923
2001Estrada-De los Santos, P, Bustillos-Cristales, R, Caballero-Mellado, J. (2001). "Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution". Applied And Environmental Microbiology. 67(6):2790-2798. [doi:10.1128/AEM.67.6.2790-2798.2001]11375196
2001Dobbelaere, S, Croonenborghs, A, Thys, A, Ptacek, D, Vanderleyden, J, Dutto, P, Labandera-Gonzalez, C, Caballero-Mellado, J, Aguirre, J, Kapulnik, Y, Brener, S, Burdman, S, Kadouri, D, Sarig, S, Okon, Y. (2001). "Responses of agronomically important crops to inoculation with Azospirillum". AUSTRALIAN JOURNAL OF PLANT PHYSIOLOGY. 28(9):871-879. [doi:10.1071/PP01074]
2001Moreno-Hagelsieb, G, Trevino, V, Pérez-Rueda, E, Smith, T, Collado-Vides, J. (2001). "Transcription unit conservation in the three domains of life: A perspective from Escherichia coli". TRENDS IN GENETICS. 17(4):175-177. [doi:10.1016/S0168-9525(01)02241-7]11275307
2001Batista, S, Catalan, A, Hernandez-Lucas, I, Martinez-Romero, E, Aguilar, O, Martinez-Drets, G. (2001). "Identification of a system that allows a Rhizobium tropici dctA mutant to grow on succinate, but not on other C4-dicarboxylates". Canadian Journal Of Microbiology. 47(6):509-518. [doi:10.1139/cjm-47-6-509]11467726
2001Ramirez-Romero, M, Tellez-Sosa, J, Barrios, H, Perez-Oseguera, A, Rosas, V, Cevallos, M. (2001). "RepA negatively autoregulates the transcription of the repABC operon of the Rhizobium etli symbiotic plasmid basic replicon". Molecular Microbiology. 42(1):195-204. [doi:10.1046/j.1365-2958.2001.02621.x]11679078
2001Gutierrez-Zamora, M, Martinez-Romero, E. (2001). "Natural endophytic association between Rhizobium etli and maize (Zea mays L.)". JOURNAL OF BIOTECHNOLOGY. 91(2-3):117-126. [doi:10.1016/S0168-1656(01)00332-7]11566384
2001Lopez-Lara, I, Geiger, O. (2001). "The nodulation protein NodG shows the enzymatic activity of an 3-oxoacyl-acyl carrier protein reductase". Molecular Plant-Microbe Interactions. 14(3):349-357. [doi:10.1094/MPMI.2001.14.3.349]11277432
2001Young, J, Kuykendall, L, Martinez-Romero, E, Kerr, A, Sawada, H. (2001). "A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis". International Journal Of Systematic And Evolutionary Microbiology. 51(1):89-103. [doi:10.1099/00207713-51-1-89]11211278
2001Vilazquez, E, Martinez-Romero, E, Rodriguez-Navarro, D, Trujillo, M, Daza, A, Mateos, P, Martinez-Molina, E, van Berkum, P. (2001). "Characterization of rhizobial isolates of Phaseolus vulgaris by staircase electrophoresis of low-molecular-weight RNA". Applied And Environmental Microbiology. 67(2):1008-1010. [doi:10.1128/AEM.67.2.1008-1010.2001]11157280
2001Fuentes-Ramirez, L, Bustillos-Cristales, R, Tapia-Hernandez, A, Jimenez-Salgado, T, Wang, E, Martinez-Romero, E, Caballero-Mellado, J. (2001). "Novel nitrogen-fixing acetic acid bacteria, Gluconacetobacter johannae sp. nov. and Gluconacetobacter azotocaptans sp. nov., associated with coffee plants". International Journal Of Systematic And Evolutionary Microbiology. 51(4):1305-1314. [doi:10.1099/00207713-51-4-1305]11491326
2001Gao, J, Terefework, Z, Chen, W, Lindstrom, K. (2001). "Genetic diversity of Rhizobia isolated from Astragalus adsurgens growing in different geographical regions of China". JOURNAL OF BIOTECHNOLOGY. 91(2-3, SI):155-168. [doi:10.1016/S0168-1656(01)00337-6]11566387
2001Arechaga-Ocampo, E, Saenz-Rivera, J, Sarath, G, Klucas, R, Arredondo-Peter, R. (2001). "Cloning and expression analysis of hemoglobin genes from maize (Zea mays ssp mays) and teosinte (Zea mays ssp parviglumis)". BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION. 1522(1):1-8. [doi:10.1016/S0167-4781(01)00288-3]11718894
2001Salgado, H, Santos-Zavaleta, A, Gama-Castro, S, Millen-Zarate, D, Diaz-Peredo, E, Sanchez-Solano, F, Pérez-Rueda, E, Bonavides-Martinez, C, Collado-Vides, J. (2001). "RegulonDB (version 3.2): Transcriptional regulation and operon organization in Escherichia coli K-12". Nucleic Acids Research. 29(1):72-74. [doi:10.1093/nar/29.1.72]11125053
2001Ramirez-Santos, J, Collado-Vides, J, Garcia-Varela, M, Gomez-Eichelmann, M. (2001). "Conserved regulatory elements of the promoter sequence of the gene rpoH of enteric bacteria". Nucleic Acids Research. 29(2):380-386. [doi:10.1093/nar/29.2.380]11139607
2001Minder, A, de Rudder, K, Narberhaus, F, Fischer, H, Hennecke, H, Geiger, O. (2001). "Phosphatidylcholine levels in Bradyrhizobium japonicum membranes are critical for an efficient symbiosis with the soybean host plant". Molecular Microbiology. 39(5):1186-1198. [doi:10.1046/j.1365-2958.2001.02325.x]11251836
2000Salgado, H, Santos-Zavaleta, A, Gama-Castro, S, Millan-Zarate, D, Blattner, F, Collado-Vides, J. (2000). "RegulonDB (version 3.0): Transcriptional regulation and operon organization in Escherichia coli K-12". Nucleic Acids Research. 28(1):65-67. [doi:10.1093/nar/28.1.65]10592182
2000Cruz-Vera, L, TOLEDO, I, Hernández-Sánchez, J, Guarneros, G. (2000). "Molecular basis for the temperature sensitivity of Escherichia coli pth(Ts)". Journal Of Bacteriology. 182(6):1523-1528. [doi:10.1128/JB.182.6.1523-1528.2000]10692356
2000Hargrove, M, Brucker, E, Stec, B, Sarath, G, Arredondo-Peter, R, Klucas, R, Olson, J, Phillips, G. (2000). "Crystal structure of a nonsymbiotic plant hemoglobin". STRUCTURE WITH FOLDING & DESIGN. 8(9):1005-1014. [doi:10.1016/S0969-2126(00)00194-5]10986467
2000Castillo, P, Márquez, J, Rubluo, A, Hernández, G, Lara, M. (2000). "Plant regeneration from callus and suspension cultures of Valeriana edulis ssp. procera via simultaneous organogenesis and somatic embryogenesis". Plant Science. 151(2):115-119. [doi:10.1016/S0168-9452(99)00203-4]10808067
2000Hernández, L, Sotolongo, M, Rosabal, Y, Menéndez, C, Ramírez, R, Caballero Mellado, J, Arrieta, J. (2000). "Structural levansucrase gene (lsdA) constitutes a functional locus conserved in the species Gluconacetobacter diazotrophicus". Archives Of Microbiology. 174(1-2):120-124. [doi:10.1007/s002030000173]10985751
2000Salgado Osorio, H, Moreno Hagelsieb, G, Smith, T, Collado Vides, P. (2000). "Operons in Escherichia coli: Genomic analyses and predictions". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 97(12):6652-6657. [doi:10.1073/pnas.110147297]10823905
2000Diouf, A, de Lajudie, P, Neyra, M, Kersters, K, Gillis, M, Martinez-Romero, E, Gueye, M. (2000). "Polyphasic characterization of Rhizobia that nodulate Phaseolus vulgaris in West Africa (Senegal and Gambia)". International Journal Of Systematic And Evolutionary Microbiology. 50(1):159-170. [doi:10.1099/00207713-50-1-159]10826800
2000Luan, P, Arechaga-Ocampo, E, Sarath, G, Arredondo-Peter, R, Klucas, R. (2000). "Analysis of a ferric leghemoglobin reductase from cowpea (Vigna unguiculata) root nodules". Plant Science. 154(2):161-170. [doi:10.1016/S0168-9452(99)00272-1]10729615
2000Reyes, J, Tabche, M, Morera, C, Girard Cuesy, M, Romero Camarena, D, Krol, E, Miranda, J, Soberón Chávez, M. (2000). "Expression pattern of Rhizobium etli ccmIEFH genes involved in c-type cytochrome maturation". Gene. 250(1-2):149-157. [doi:10.1016/S0378-1119(00)00176-1]10854788
2000Wang, E, Martinez-Romero, E. (2000). "Sesbania herbacea-Rhizobium huautlense nodulation in flooded soils and comparative characterization of S. herbacea-nodulating Rhizobia in different environments". Microbial Ecology. 40(1):25-32. [doi:10.1007/s002480000010]10977874
2000González-Pasayo, R, Martínez Romero, M. (2000). "Multiresistance genes of Rhizobium etli CFN42". Molecular Plant-Microbe Interactions. 13(5):572-577. [doi:10.1094/MPMI.2000.13.5.572]10796024
2000Martinez-Romero, E, Wang, E, Merino, A, Caballero-Mellado, J, Rogel, M, Gandara, B, Toledo, I, Martinez-Iomero, J. (2000). "Ribosomal gene based phylogenies on trial: The case of Rhizobium and related genera". Biology Of Plant-Microbe Interactions, Vol 2. ():59-64.
2000van Helden, J, Andre, B, Collado Vides, P. (2000). "A web site for the computational analysis of yeast regulatory sequences". Yeast. 16(2):177-187. <a target="_blank" href="http://dx.doi.org/10.1002/(SICI)1097-0061(20000130)16:23.0.CO;2-9">[doi:10.1002/(SICI)1097-0061(20000130)16:23.0.CO;2-9]10641039
2000Schoenbeck, M, Temple, S, Trepp, G, Blumenthal, J, Samac, D, Gantt, J, Hernandez, G, Vance, C. (2000). "Decreased NADH glutamate synthase activity in nodules and flowers of alfalfa (Medicago sativa L.) transformed with an antisense glutamate synthase transgene". Journal Of Experimental Botany. 51(342):29-39. [doi:10.1093/jexbot/51.342.29]10938793
2000Strainic, M, Sullivan, J, Collado-Vides, J, deHaseth, P. (2000). "Promoter interference in a bacteriophage lambda control region: Effects of a range of interpromoter distances". Journal Of Bacteriology. 182(1):216-220. [doi:10.1128/JB.182.1.216-220.2000]10613884
2000Perez-Rueda, E, Collado-Vides, J. (2000). "The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12". Nucleic Acids Research. 28(8):1838-1847. [doi:10.1093/nar/28.8.1838]10734204
2000Jarabo-Lorenzo, A, Velazquez, E, Perez-Galdona, R, Vega-Hernandez, M, Martinez-Molina, E, Mateos, P, Vinuesa, P, Martinez-Romero, E, Leon-Barrios, M. (2000). "Restriction fragment length polymorphism analysis of 16S rDNA and low molecular weight RNA profiling of rhizobial isolates from shrubby legumes endemic to the Canary islands". Systematic And Applied Microbiology. 23(3):418-425. [doi:10.1016/S0723-2020(00)80073-9]11108022
2000de Rudder, K, Lopez-Lara, I, Geiger, O. (2000). "Inactivation of the gene for phospholipid N-methyltransferase in Sinorhizobium meliloti: Phosphatidylcholine is required for normal growth". Molecular Microbiology. 37(4):763-772. [doi:10.1046/j.1365-2958.2000.02032.x]10972799
2000Flores, M, Mavingui, P, Perret, X, Broughton, W, Romero, D, Hernandez, G, Davila, G, Palacios, R. (2000). "Prediction, identification, and artificial selection of DNA rearrangements in Rhizobium: Toward a natural genomic design". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 97(16):9138-9143. [doi:10.1073/pnas.97.16.9138]10922070
2000Castillo, A, Taboada, H, Mendoza, A, Valderrama, B, Encarnacion, S, Mora, J. (2000). "Role of GOGAT in carbon and nitrogen partitioning in Rhizobium etli". MICROBIOLOGY-SGM. 146(7):1627-1637. [doi:10.1099/00221287-146-7-1627]10878127
2000Brom, S, Garcia-de los Santos, A, Cervantes, L, Palacios, R, Romero, D. (2000). "In Rhizobium etli symbiotic plasmid transfer, nodulation competitivity and cellular growth require interaction among different replicons". Plasmid. 44(1):34-43. [doi:10.1006/plas.2000.1469]10873525
2000Sohlenkamp, C, de Rudder, K, Rohrs, V, Lopez-Lara, I, Geiger, O. (2000). "Cloning and characterization of the gene for phosphatidylcholine synthase". JOURNAL OF BIOLOGICAL CHEMISTRY. 275(25):18919-18925. [doi:10.1074/jbc.M000844200]10858449
2000Ramirez-Romero, M, Soberon, N, Perez-Oseguera, A, Tellez-Sosa, J, Cevallos, M. (2000). "Structural elements required for replication and incompatibility of the Rhizobium etli symbiotic plasmid". Journal Of Bacteriology. 182(11):3117-3124. [doi:10.1128/JB.182.11.3117-3124.2000]10809690
2000Weissenmayer, B, Geiger, O, Benning, C. (2000). "Disruption of a gene essential for sulfoquinovosyldiacylglycerol biosynthesis in Sinorhizobium meliloti has no detectable effect on root nodule symbiosis". Molecular Plant-Microbe Interactions. 13(6):666-672. [doi:10.1094/MPMI.2000.13.6.666]10830266
2000Valencia-Morales, E, Romero, D. (2000). "Recombination enhancement by replication (RER) in Rhizobium etli". Genetics. 154(3):971-983. 10757747
2000Sohlenkamp, C, Shelden, M, Howitt, S, Udvardi, M. (2000). "Characterization of Arabidopsis AtAMT2, a novel ammonium transporter in plants". FEBS LETTERS. 467(2-3):273-278. [doi:10.1016/S0014-5793(00)01153-4]10675553
2000Martinez-Salazar, J, Romero, D. (2000). "Role of the ruvB gene in homologous and homeologous recombination in Rhizobium etli". Gene. 243(1-2):125-131. [doi:10.1016/S0378-1119(99)00548-X]10675620
2000Tapia-Hernandez, A, Bustillos-Cristales, M, Jimenez-Salgado, T, Caballero-Mellado, J, Fuentes-Ramirez, L. (2000). "Natural endophytic occurrence of Acetobacter diazotrophicus in pineapple plants". Microbial Ecology. 39(1):49-55. [doi:10.1007/s002489900190]10790517
2000Arredondo Peter, J, Ramírez, Y, Sarath, G, Klucas, R. (2000). "SEQUENCE ANALYSIS OF AN ANCIENT HEMOGLOBIN cDNA ISOLATED FROM THE MOSS Physcomitrella patens". Plant Physiology. 122():1457-.
2000van Heiden, J, Rios, A, Collado-Vides, J. (2000). "Discovering regulatory elements in non-coding sequences by analysis of spaced dyads". Nucleic Acids Research. 28(8):1808-1818. [doi:10.1093/nar/28.8.1808]10734201
2000Lira-Ruan K., Sarath G., Klucas R.V., Arredondo-Peter R.. (2000). "Characterization of leghemoglobin from a mimosoid legume, Leucaena esculenta, root nodules". Revista Brasileira de Fisiologia Vegetal. 12(1):37-44.
2000Perez-Rueda, E, Collado-Vides, J. (2000). "The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12". Nucleic Acids Research. 28(8):1838-1847. [doi:10.1093/nar/28.8.1838]10734204
2000Cevallos Gaos, M. (2000). "Armas biológicas". ¿Cómo ves?. 15():10-14.
2000López-Lara, I, Geiger, O. (2000). "Expression and purification of four different rhizobial acyl carrier proteins". MICROBIOLOGY-SGM. 146(4):839-849. [doi:10.1099/00221287-146-4-839]10784042
2000Girard Cuesy, M, Brom Klanner, S, Dávalos Rodríguez, A, López, O, Soberón Chávez, M, Romero Camarena, D. (2000). "Differential regulation of fixN-reiterated genes in Rhizobium etli by a novel fixL-fixK cascade". Molecular Plant-Microbe Interactions. 13(12):1283-1292. [doi:10.1094/MPMI.2000.13.12.1283]11106020
1999Romero, D, Martinez-Salazar, J, Ortiz, E, Rodriguez, C, Valencia-Morales, E. (1999). "Repeated sequences in bacterial chromosomes and plasmids: A glimpse from sequenced genomes". Research In Microbiology. 150(9-10):735-743. [doi:10.1016/S0923-2508(99)00119-9]10673011
1999Romero, D, Barrón, C, Gómez, S. (1999). "The optimal geometry of Lennard-Jones clusters: 148-309". COMPUT PHYS COMMUN. 123(1-3):87-96. [doi:10.1016/s0010-4655(99)00259-3]
1999Barrón, C, Gómez, S, Romero, D, Saavedra, A. (1999). "A genetic algorithm for Lennard-Jones atomic clusters". Applied Mathematics Letters. 12(7):85-90. [doi:10.1016/S0893-9659(99)00106-8]
1999Collado Vides, P, Hofestadt, R, Mavrovouniotis, M, Michal, G. (1999). "Modeling and simulation of gene regulation and metabolic pathways". Biosystems. 49(1):79-82. [doi:10.1016/S0303-2647(98)00081-1]10091975
1999Corvera Poire, A, Prome, D, Prome, J, Martínez Romero, M, Romero Camarena, D. (1999). "The nolL gene from Rhizobium etli determines nodulation efficiency by mediating the acetylation of the fucosyl residue in the nodulation factor". Molecular Plant-Microbe Interactions. 12(3):236-246. [doi:10.1094/MPMI.1999.12.3.236]10065560
1999Brom Klanner, S, Romero Camarena, D. (1999). "Plasmid biology 98: international symposium on plasmid biology". Plasmid. 41(2):141-177. 10087219
1999Laeremans, T, Snoeck, C, Marien, J, Verreth, C, Martínez Romero, M, Prome, J, Vanderleyden, J. (1999). "Phaseolus vulgaris recognizes Azorhizobium caulinodans nod factors with a variety of chemical substituents". Molecular Plant-Microbe Interactions. 12(9):820-824. [doi:10.1094/MPMI.1999.12.9.820]10494633
1999Wang, E, Roel, M, Garcia-de los Santos, A, Martinez-Romero, J, Cevallos, M, Martinez-Romero, E. (1999). "Rhizobium etli bv. mimosae, a novel biovar isolated from Mimosa affinis". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(4):1479-1491. [doi:10.1099/00207713-49-4-1479]10555329
1999Thieffry, D, Romero, D. (1999). "The modularity of biological regulatory networks.". Biosystems. 50(1):49-59. [doi:10.1016/s0303-2647(98)00087-2]10235650
1999Cevallos Gaos, M. (1999). "La Peste, ayer y hoy". ¿Cómo ves?. 12():22-26.
1999Caballero-Mellado, J, Lopez-Reyes, L, Bustillos-Cristales, R. (1999). "Presence of 16S rRNA genes in multiple replicons in Azospirillum brasilense". Fems Microbiology Letters. 178(2):283-288. [doi:10.1111/j.1574-6968.1999.tb08689.x]
1999Caballero-Mellado, J, Martinez-Romero, E. (1999). "Soil fertilization limits the genetic diversity of Rhizobium in bean nodules". Symbiosis. 26(2):111-121.
1999Wang, E, Martinez-Romero, J, Martinez-Romero, E. (1999). "Genetic diversity of Rhizobia from Leucaena leucocephala nodules in Mexican soils". MOLECULAR ECOLOGY. 8(5):711-724. [doi:10.1046/j.1365-294X.1999.00608.x]
1999Fuentes-Ramirez, L, Caballero-Mellado, J, Sepulveda, J, Martinez-Romero, E. (1999). "Colonization of sugarcane by Acetobacter diazotrophicus is inhibited by high N-fertilization". Fems Microbiology Ecology. 29(2):117-128. [doi:10.1016/S0168-6496(98)00125-1]
1999de Rudder, K, Sohlenkamp, C, Geiger, O. (1999). "Plant-exuded choline is used for rhizobial membrane lipid biosynthesis by phosphatidylcholine synthase". JOURNAL OF BIOLOGICAL CHEMISTRY. 274(28):20011-20016. [doi:10.1074/jbc.274.28.20011]10391951
1999Herrera-Cervera, J, Caballero-Mellado, J, Laguerre, G, Tichy, H, Requena, N, Amarger, N, Martinez-Romero, E, Olivares, J, Sanjuan, J. (1999). "At least five rhizobial species nodulate Phaseolus vulgaris in a Spanish soil". Fems Microbiology Ecology. 30(1):87-97. [doi:10.1016/S0168-6496(99)00044-6]
1999Tan, Z, Wang, E, Peng, G, Zhu, M, Martinez-Romero, E, Chen, W. (1999). "Characterization of bacteria isolated from wild legumes in the north- western regions of China". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(4):1457-1469. [doi:10.1099/00207713-49-4-1457]10555327
1999Salgado, H, Santos, A, Garza-Ramos, U, van Helden, J, Diaz, E, Collado-Vides, J. (1999). "RegulonDB (version 2.0): A database on transcriptional regulation in Escherichia coli". Nucleic Acids Research. 27(1):59-60. [doi:10.1093/nar/27.1.59]9847141
1999Moreno-Hagelsieb, G, Gomez-Puyou, A, Soberon, X. (1999). "Escherichia coli TEM1 beta-lactamase in CTAB reverse micelles: exchange/diffusion-limited catalysis". FEBS LETTERS. 459(1):111-114. [doi:10.1016/S0014-5793(99)01228-4]10508927
1999Castillo, M, Flores, M, Mavingui, P, Martinez-Romero, E, Palacios, R, Hernandez, G. (1999). "Increase in alfalfa nodulation, nitrogen fixation, and plant growth by specific DNA amplification in Sinorhizobium meliloti". Applied And Environmental Microbiology. 65(6):2716-2722. [doi:10.1128/aem.65.6.2716-2722.1999]10347066
1999Soberon, M, Lopez, O, Morera, C, Girard, M, Tabche, M, Miranda, J. (1999). "Enhanced nitrogen fixation in a Rhizobium etli ntrC mutant that overproduces the Bradyrhizobium japonicum symbiotic terminal oxidase cbb(3)". Applied And Environmental Microbiology. 65(5):2015-2019. 10223993
1999Wang, E, van Berkum, P, Sui, X, Beyene, D, Chen, W, Martinez-Romero, E. (1999). "Diversity of Rhizobia associated with Amorpha fruticosa isolated from Chinese soils and description of Mesorhizobium amorphae sp. nov.". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(1):51-65. [doi:10.1099/00207713-49-1-51]10028247
1999Phillips, D, Joseph, C, Yang, G, Martinez-Romero, E, Sanborn, J, Volpin, H. (1999). "Identification of lumichrome as a Sinorhizobium enhancer of alfalfa root respiration and shoot growth". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 96(22):12275-12280. [doi:10.1073/pnas.96.22.12275]10535912
1999Ramirez, M, Valderrama, B, Arredondo-Peter, R, Soberon, M, Mora, J, Hernandez, G. (1999). "Rhizobium etli genetically engineered for the heterologous expression of Vitreoscilla sp. hemoglobin: Effects on free-living and symbiosis". Molecular Plant-Microbe Interactions. 12(11):1008-1015. [doi:10.1094/MPMI.1999.12.11.1008]
1998Vasquez-Arroyo, J, Sessitsch, A, Martinez, E, Pena-Cabriales, J. (1998). "Nitrogen fixation and nodule occupancy by native strains of Rhizobium on different cultivars of common bean (Phaseolus vulgaris L.)". PLANT AND SOIL. 204(1):147-154. [doi:10.1023/A:1004399531966]
1998Encarnacion, S, Calderon, J, Gelbard, A, Cooper, A, Mora, J. (1998). "Glutamine biosynthesis and the utilization of succinate and glutamine by Rhizobium etli and Sinorhizobium meliloti". MICROBIOLOGY-SGM. 144(9):2629-2638. [doi:10.1099/00221287-144-9-2629]9782512
1998Laeremans, T, Martinez-Romero, E, Vanderleyden, J. (1998). "Isolation and sequencing of a second Rhizobium tropici CFN299 genetic locus that contains genes homologous to amino acid sulphate activation genes". Dna Sequence. 9(1):65-70. [doi:10.3109/10425179809050027]9773278
1998Hernandez-Sanchez, J, Valadez, J, Herrera, J, Ontiveros, C, Guarneros, G. (1998). "lambda bar minigene-mediated inhibition of protein synthesis involves accumulation of peptidyl-tRNA and starvation for tRNA". EMBO JOURNAL. 17(13):3758-3765. [doi:10.1093/emboj/17.13.3758]9649445
1998Martinez-Romero, E, Hernandez-Lucas, I, Pena-Cabriales, J, Castellanos, J. (1998). "Symbiotic performance of some modified Rhizobium etli strains in assays with Phaseolus vulgaris beans that have a high capacity to fix N2". PLANT AND SOIL. 204(1):89-94. [doi:10.1023/A:1004383028331]
1998Ludwig, W, Amann, R, Martinez-Romero, E, Schonhuber, W, Bauer, S, Neef, A, Schleifer, K. (1998). "rRNA based identification and detection systems for Rhizobia and other bacteria". PLANT AND SOIL. 204(1):1-19. [doi:10.1023/A:1004350708767]
1998Sievers, M, Schlegel, H, Caballero-Mellado, J, Dobereiner, J, Ludwig, W. (1998). "Phylogenetic identification of two major nitrogen-fixing bacteria associated with sugarcane". Systematic And Applied Microbiology. 21(4):505-508. [doi:10.1016/S0723-2020(98)80062-3]9924818
1998Dunn, M. (1998). "Tricarboxylic acid cycle and anaplerotic enzymes in Rhizobia". Fems Microbiology Reviews. 22(2):105-123. [doi:10.1016/S0168-6445(98)00010-2]9729766
1998Perez-Ramirez, N, Rogel, M, Wang, E, Castellanos, J, Martinez-Romero, E. (1998). "Seeds of Phaseolus vulgaris bean carry Rhizobium etli". Fems Microbiology Ecology. 26(4):289-296. [doi:10.1016/S0168-6496(98)00043-9]
1998Mavingui, P, Laeremans, T, Flores, M, Romero, D, Martinez-Romero, E, Palacios, R. (1998). "Genes essential for nod factor production and nodulation are located on a symbiotic amplicon (AMPRtrCFN299pc60) in Rhizobium tropici". Journal Of Bacteriology. 180(11):2866-2874. [doi:10.1128/JB.180.11.2866-2874.1998]9603874
1998Rodriguez, C, Romero, D. (1998). "Multiple recombination events maintain sequence identity among members of the nitrogenase multigene family in Rhizobium etli". Genetics. 149(2):785-794. 9611191
1998Arredondo-Peter, R, Hargrove, M, Moran, J, Sarath, G, Klucas, R. (1998). "Plant hemoglobins". Plant Physiology. 118(4):1121-1125. [doi:10.1104/pp.118.4.1121]9847086
1998Collado-Vides, J, Gutierrez-Rios, R, Bel-Enguix, G. (1998). "Networks of transcriptional regulation encoded in a grammatical model". Biosystems. 47(1-2):103-118. [doi:10.1016/S0303-2647(98)00016-1]9715754
1998Olsthoorn, M, López Lara, I, Petersen, B, Bock, K, Haverkamp, J, Spaink, H, Thomas Oates, J. (1998). "Novel branched Nod factor structure results from -(1 3) fucosyl transferase activity: the major lipo-chitin oligosaccharides from Mesorhizobium loti strain NZP2213 bear an -(1 3) fucosyl subtituent on a nonterminal backbone residue". Biochemistry. 37(25):9024-9032.
1998Huerta, A, Salgado, H, Thieffry, D, Collado-Vides, J. (1998). "RegulonDB: A database on transcriptional regulation in Escherichia coli". Nucleic Acids Research. 26(1):55-59. [doi:10.1093/nar/26.1.55]9399800
1998Mandon, K, Michel-Reydellet, N, Encarnacion, S, Kaminski, P, Leija, A, Cevallos, M, Elmerich, C, Mora, J. (1998). "Poly-ß-hydroxybutyrate turnover in Azorhizobium caulinodans is required for growth and affects nifA expression". Journal Of Bacteriology. 180(19):5070-5076. [doi:10.1128/JB.180.19.5070-5076.1998]9748438
1998Mendoza, A, Valderrama, B, Leija, A, Mora, J. (1998). "nifA-dependent expression of glutamate dehydrogenase in Rhizobium etli modifies nitrogen partitioning during symbiosis". Molecular Plant-Microbe Interactions. 11(2):83-90. [doi:10.1094/MPMI.1998.11.2.83]9450332
1998van Helden, J, Andre, B, Collado Vides, P. (1998). "Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies". Journal Of Molecular Biology. 281(5):827-842. [doi:10.1006/jmbi.1998.1947]9719638
1998Flores, M, Mavingui, P, Girard, L, Perret, X, Broughton, W, Martinez-Romero, E, Davila, G, Palacios, R. (1998). "Three replicons of Rhizobium sp. strain NGR234 harbor symbiotic gene sequences". Journal Of Bacteriology. 180(22):6052-6053. [doi:10.1128/JB.180.22.6052-6053.1998]9811668
1998Wang, E, van Berkum, P, Beyene, D, Sui, X, Dorado, O, Chen, W, Martinez-Romero, E. (1998). "Rhizobium huautlense sp. nov., a symbiont of Sesbania herbacea that has a close phylogenetic relationship with Rhizobium galegae". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 48(3):687-699. [doi:10.1099/00207713-48-3-687]9734023
1998Thieffry Jacot-Descombes, D, Huerta Moreno, A, Pérez Rueda, E, Collado Vides, P. (1998). "From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli". Bioessays. 20(5):433-440. <a target="_blank" href="http://dx.doi.org/10.1002/(SICI)1521-1878(199805)20:53.0.CO;2-2">[doi:10.1002/(SICI)1521-1878(199805)20:53.0.CO;2-2]9670816
1998Pérez Rueda, E, Gralla, J, Collado Vides, P. (1998). "Genomic position analyses and the transcription machinery". Journal Of Molecular Biology. 275(2):165-170. [doi:10.1006/jmbi.1997.1465]9466899
1998Rosenblueth, M, Hynes, M, Martinez-Romero, E. (1998). "Rhizobium tropici teu genes involved in specific uptake of Phaseolus vulgaris bean-exudate compounds". MOLECULAR & GENERAL GENETICS. 258(6):587-598. [doi:10.1007/s004380050772]9671027
1998Thieffry, D, Salgado, H, Huerta, A, Collado-Vides, J. (1998). "Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12". Bioinformatics. 14(5):391-400. [doi:10.1093/bioinformatics/14.5.391]9682052
1997Romero, D, Sánchez-Flores, A. (1997). "Omnipotence in stretchable two-dimensional scaling". MATH SOC SCI. 33(1):1-21. [doi:10.1016/S0165-4896(96)00817-7]
1997Collado-Vides, J, Huerta, A, Klose, K. (1997). "Three models of gene regulation in E. coli". LECT NOTES COMPUT SC. 1278():72-78.
1997Calderón, J, Olvera, L, Martinez, L, Davila, G. (1997). "A Neurospora crassa mutant altered in the regulation of L-amino acid oxidase". MICROBIOLOGY-SGM. 143(6):1969-1974. [doi:10.1099/00221287-143-6-1969]9202472
1997Blattner, F, Plunkett, G, Bloch, C, Perna, N, Burland, V, Riley, M, ColladoVides, J, Glasner, J, Rode, C, Mayhew, G, Gregor, J, Davis, N, Kirkpatrick, H, Goeden, M, Rose, D, Mau, B, Shao, Y. (1997). "The complete genome sequence of Escherichia coli K-12". Science. 277(5331):1453-1462. [doi:10.1126/science.277.5331.1453]9278503
1997Thieffry Jacot-Descombes, D, Rosenblueth, D, Huerta Moreno, A, Salgado Osorio, H, Collado Vides, P. (1997). "Definite-clause grammars for the analysis of CIS-regulatory regions in E. coli.". Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. ():441-452. 9390313
1997Tan, Z, Xu, X, Wang, E, Gag, J, MartinezRomero, E, Chen, W. (1997). "Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related Rhizobia". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 47(3):874-879. [doi:10.1099/00207713-47-3-874]9226921
1997Barrón, C, Gómez, S, Romero, D. (1997). "Lower energy icosahedral atomic clusters with incomplete core". Applied Mathematics Letters. 10(5):25-28. [doi:10.1016/S0893-9659(97)00078-5]
1997Romero Camarena, D, Palacios de la Lama, R. (1997). "Gene amplification and genomic plasticity in prokaryotes". Annual Review of Genetics. 31():91-111. [doi:10.1146/annurev.genet.31.1.91]9442891
1997Jiménez-Salgado, T, FuentesRamirez, L, Tapia-Hernández, A, Mascarua-Esparza, M, Martinez-Romero, E, CaballeroMellado, J. (1997). "Coffea arabica L., a new host plant for Acetobacter diazotrophicus, and isolation of other nitrogen-fixing acetobacteria". Applied And Environmental Microbiology. 63(9):3676-3683. [doi:10.1128/AEM.63.9.3676-3683.1997]9293018
1997Mavingui Malonda, A, Flores López, M, Romero Camarena, D, Martínez Romero, M, Palacios de la Lama, R. (1997). "Generation of Rhizobium Strains with Improved Symbiotic Properties by Random Dna Amplification (RDA)". Nature Biotechnology. 15(6):564-569. [doi:10.1038/nbt0697-564]9181580
1997Thieffry, D. (1997). "Contributions of the ''Rouge-Cloitre group'' to the notion of ''messenger RNA''". HISTORY AND PHILOSOPHY OF THE LIFE SCIENCES. 19(1):89-111. 9284644
1997RamirezRomero, M, Bustos, P, Girard, L, Rodriguez, O, Cevallos, M, Davila, G. (1997). "Sequence, localization and characteristics of the replicator region of the symbiotic plasmid of Rhizobium etli". MICROBIOLOGY-SGM. 143(8):2825-2831. [doi:10.1099/00221287-143-8-2825]9274036
1997MirandaRios, J, Morera, C, Taboada, H, Davalos, A, Encarnacion, S, Mora, J, Soberon, M. (1997). "Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb(3), in Rhizobium etli". Journal Of Bacteriology. 179(22):6887-6893. [doi:10.1128/jb.179.22.6887-6893.1997]9371431
1997Hernandez, J, Ontiveros, C, Valadez, J, Buckingham, R, Guarneros, G. (1997). "Regulation of protein synthesis by minigene expression". Biochimie. 79(8):527-531. [doi:10.1016/S0300-9084(97)82746-0]9451455
1997Barrera, L, Trujillo, M, Goodfellow, M, Garcia, F, HernandezLucas, I, Davila, G, vanBerkum, P, MartinezRomero, E. (1997). "Biodiversity of bradyrhizobia nodulating Lupinus spp.". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 47(4):1086-1091. [doi:10.1099/00207713-47-4-1086]9336911
1997AguilarGaytan, R, Cerbon, M, Cevallos, M, Lizano, M, Huberman, A. (1997). "Sequence of a cDNA encoding the molt-inhibiting hormone from the Mexican crayfish Procambarus bouvieri (Crustacea, Decapoda)". ASIA-PACIFIC JOURNAL OF MOLECULAR BIOLOGY AND BIOTECHNOLOGY. 5(1):51-55.
1997Chichkova, S, Arellano, J, Svoboda, S, Hernandez, G. (1997). "Ectopic overexpression of NADH-glutamate synthase in transgenic tobacco modifies plant response to excess of ammonium.". Plant Physiology. 114(3, S):911-911.
1997GarciadelosSantos, A, Brom, S. (1997). "Characterization of two plasmid-borne lps beta loci of Rhizobium etli required for lipopolysaccharide synthesis and for optimal interaction with plants". Molecular Plant-Microbe Interactions. 10(7):891-902. [doi:10.1094/MPMI.1997.10.7.891]9304861
1997Quinto, C, Wijfjes, A, Bloemberg, G, Blok-Tip, L, López-Lara, I, Lugtenberg, B, Thomas-Oates, J, Spaink, H. (1997). "Bacterial nodulation protein nodZ is a chitin oligosaccharide fucosyltransferase which can also recognize related substrates of animal origin". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 94(9):4336-4341. [doi:10.1073/pnas.94.9.4336]9113990
1997Spaink, H, Bakkers, J, Bladergroen, M, Bloemberg, G, Dandal, I, Díaz, C, Blok Tip, L, Gisel, A, Harteveld, M, López Lara, I, Kafetzopoulos, D, Kamst, E, Kijne, J, Meijer, D, Lugtenberg, B, Ovtsyna, A, Potrykus, I, Quaedvlieg, N, Quinto, C, Ritsema, T, Sautter, C, Schlaman, H, Thomas Oates, J, van Boom, J, van der Drift, K, van der Marel, G, van Leeuwen, S, Veldhuis, A, Wijfjes, A. (1997). "The molecular basis of host specificity of Rhizobia". Biology of plant-microbe interactions: Proceedings of the 8th. International Symposium on Molecular Plant-Microbr Interactions, Knoxville, Tennessee, july 14-19, 1996. 1():299-306.
1997Laeremans, T, Coolsaet, N, Verreth, C, Snoeck, C, Hellings, N, Vanderleyden, J, Martinez-Romero, E. (1997). "Functional redundancy of genes for sulphate activation enzymes in Rhizobium sp. BR816". MICROBIOLOGY-SGM. 143(12):3933-3942. [doi:10.1099/00221287-143-12-3933]9421916
1997Dunn, M, Araiza, G, Cevallos, M, Mora, J. (1997). "Regulation of pyruvate carboxylase in Rhizobium etli". Fems Microbiology Letters. 157(2):301-306. [doi:10.1016/S0378-1097(97)00491-6]9435112
1997Ontiveros, C, Valadez, J, Hernandez, J, Guarneros, G. (1997). "Inhibition of Escherichia coli protein synthesis by abortive translation of phage lambda minigenes". Journal Of Molecular Biology. 269(2):167-175. [doi:10.1006/jmbi.1997.1017]9191062
1996Girard, L, Valderrama, B, Palacios, R, Romero, D, Davila, G. (1996). "Transcriptional activity of the symbiotic plasmid of Rhizobium etli is affected by different environmental conditions". MICROBIOLOGY-SGM. 142(10):2847-2856. [doi:10.1099/13500872-142-10-2847]
1996Thomas-Oates, J, van den Berg, J, Bloemberg, G, van der Drift, K, Geiger, O, López Lara, I, Rademaker, G, Spaink, H. (1996). "Structural determination and biosynthetic studies of the rhizobial Nod metabolites: the lipo-chitin oligosaccharides". Mass spectrometry in the Biological Sciences. ():385-401. [doi:10.1007/978-1-4612-0229-5]
1996Folch Mallol, J, Marroqui, S, Sousa, C, Manyani, H, López Lara, I, van der Drift, K, Haverkamp, J, Quinto, C, Gil Serrano, A, Thomas Oates, J, Spaink, H, Megías, M. (1996). "Characterization of Rhizobium tropici CIAT899 nodulation factors: the role of nodH and nodPQ in their sulphation". Molecular Plant-Microbe Interactions. 9(3):151-163.
1996Pérez Oseguera, M, GUERECA, L. (1996). "Acceptor Reactions of Levansucrase from Bacillus circulans. Enzyme Eng. XIII Annals. New York Academy of Science.". Acceptor Reactions of Levansucrase from Bacillus circulans. Vol 799():743-746.
1996Romero, D, Martinez, L, Fionova, L. (1996). "Computer simulation of grain boundary spatial distribution in a three-dimensional polycrystal with cubic structure". Acta Mater. 44(1):391-402. [doi:10.1016/1359-6454(95)00142-X]
1996Barrón, C, Gómez, S, Romero, D. (1996). "Archimedean polyhedron structure yields a lower energy atomic cluster". Applied Mathematics Letters. 9(5):75-78. [doi:10.1016/0893-9659(96)00076-6]
1996Dunn, M, Encarnacion, S, Araiza, G, Vargas, M, Davalos, A, Peralta, H, Mora, Y, Mora, J. (1996). "Pyruvate carboxylase from Rhizobium etli: Mutant characterization, nucleotide sequence, and physiological role". Journal Of Bacteriology. 178(20):5960-5970. [doi:10.1128/jb.178.20.5960-5970.1996]8830693
1996Taboada, H, Encarnacion, S, Vargas, M, Mora, Y, MartinezRomero, E, Mora, J. (1996). "Glutamine synthetase II constitutes a novel taxonomic marker in Rhizobium etli and other Rhizobium species". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 46(2):485-491. [doi:10.1099/00207713-46-2-485]
1996ColladoVides, J. (1996). "Towards a unified grammatical model of s70 and s54 bacterial promoters". Biochimie. 78(5):351-363. [doi:10.1016/0300-9084(96)84767-5]8905154
1996Rosenblueth, D, Thieffry, D, Huerta, A, Salgado, H, ColladoVides, J. (1996). "Syntactic recognition of regulatory regions in Escherichia coli". COMPUTER APPLICATIONS IN THE BIOSCIENCES. 12(5):415-422. [doi:10.1093/bioinformatics/12.5.415]8996790
1996De La Vega, F, Galindo, J, Old, L, Guarneros, G. (1996). "Microbial genes homologous to the peptidyl-tRNA hydrolase-encoding gene of Escherichia coli". Gene. 169(1):97-100. [doi:10.1016/0378-1119(95)00823-3]8635758
1996Martinez-Romero, E, Caballero-Mellado, J. (1996). "Rhizobium phylogenies and bacterial genetic diversity". CRITICAL REVIEWS IN PLANT SCIENCES. 15(2):113-140. [doi:10.1080/07352689609701938]
1996Valderrama, B, Davalos, A, Girard, L, Morett, E, Mora, J. (1996). "Regulatory proteins and CIS-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes". Journal Of Bacteriology. 178(11):3119-3126. [doi:10.1128/jb.178.11.3119-3126.1996]8655489
1996Thieffry, D. (1996). "Escherichia coli as a model system with which to study cell differentiation". HISTORY AND PHILOSOPHY OF THE LIFE SCIENCES. 18(2):163-193. 9122371
1996Cevallos, M, Encarnacion, S, Leija, A, Mora, Y, Mora, J. (1996). "Genetic and physiological characterization of a Rhizobium etli mutant strain unable to synthesize poly-ß-hydroxybutyrate". Journal Of Bacteriology. 178(6):1646-1654. [doi:10.1128/jb.178.6.1646-1654.1996]8626293
1996MartinezRomero, E. (1996). "Comments on Rhizobium systematics. Lessons from R-tropici and R-etli.". Biology of Plant-Microbe Interactions. ():503-508.
1996Hofestadt, R, Mavrovouniotis, M, Collado Vides, P, Loffler, M. (1996). "Modeling and simulation of metabolic pathways, gene regulation and cell differentiation. International Conference and Research Center for Computer Science, Schloss Dagstuhl, Saarland, Germany, 22-27 October, 1995". Bioessays. 18(4):333-335. [doi:10.1002/bies.950180412]8967902
1996Laeremans, T, Caluwaerts, I, Verreth, C, Rogel Hernández, M, Vanderleyden, J, Martínez Romero, M. (1996). "Isolation and characterization of the Rhizobium tropici nod factor sulfation genes". Molecular Plant-Microbe Interactions. 9(6):492-500. [doi:10.1094/MPMI-9-0492]8755625
1996MartinezRomero, E, CaballeroMellado, J. (1996). "Rhizobium phylogenies and bacterial genetic diversity". CRITICAL REVIEWS IN PLANT SCIENCES. 15(2):113-140. [doi:10.1080/713608131]
1996Thieffry, D, Burian, R. (1996). "Jean Brachet's alternative scheme for protein synthesis". TRENDS IN BIOCHEMICAL SCIENCES. 21(3):114-117. [doi:10.1016/S0968-0004(96)10015-3]8882586
1996Santos, A, Brom, S, Romero, D. (1996). "Rhizobium plasmids in bacteria-legume interactions". World Journal Of Microbiology & Biotechnology. 12(2):119-125. [doi:10.1007/BF00364676]24415159
1996Arellano, J, Vazquez, F, Villegas, T, Hernandez, G. (1996). "Establishment of transformed root cultures of Perezia cuernavacana producing the sesquiterpene quinone perezone". PLANT CELL REPORTS. 15(7):455-458. 24178452
1995POUPOT, R, MARTINEZROMERO, E, GAUTIER, N, PROME, J. (1995). "Wild type Rhizobium etli, a bean symbiont, produces acetylfucosylated, N-methylated, and carbamoylated nodulation factors". JOURNAL OF BIOLOGICAL CHEMISTRY. 270(11):6050-6055. [doi:10.1074/jbc.270.11.6050]7890737
1995Peralta Díaz, H, CALDERON JIMENEZ, J, DU PONT, G, DURAN, S, HUERTA SAQUERO, A. (1995). "El metabolismo de nitrógeno y carbono en Rhizobium en vida libre y en simbiosis con leguminosas.". Biotecnologia Aplicada. 3(5):208-223.
1995Mendoza Herrera, A, Leija Salas, A, Martínez Romero, M, Hernández Delgado, G, Mora Celis, J. (1995). "The enhancement of ammonium assimilation in Rhizobium etli prevents nodulation of Phaseolus vulgaris". Molecular Plant-Microbe Interactions. 8(4):584-592. [doi:10.1094/MPMI-8-0584]8589413
1995Toledo García, I, Rangel, P, Hansberg, W. (1995). "Redox imbalance at the start of each morphogenetic step of Neurospora crassa conidiation". ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. 319(2):519-524. [doi:10.1006/abbi.1995.1326]7786037
1995BARRIOS, H, Fischer, H, Hennecke, H, MORETT, E. (1995). "OVERLAPPING PROMOTERS FOR 2 DIFFERENT RNA-POLYMERASE HOLOENZYMES CONTROL Bradyrhizobium-japonicum nifA EXPRESSION". Journal Of Bacteriology. 177(7):1760-1765. [doi:10.1128/jb.177.7.1760-1765.1995]7896698
1995ROMERO, D, MARTINEZSALAZAR, J, GIRARD, L, BROM, S, DAVILA, G, PALACIOS, R, FLORES, M, RODRIGUEZ, C. (1995). "Discrete amplifiable regions (amplicons) in the symbiotic plasmid of Rhizobium etli CFN42". Journal Of Bacteriology. 177(4):973-980. [doi:10.1128/jb.177.4.973-980.1995]7860608
1995DURAN, S, CALDERON, J. (1995). "ROLE OF THE GLUTAMINE TRANSAMINASE-OMEGA-AMIDASE PATHWAY AND GLUTAMINASE IN GLUTAMINE DEGRADATION IN Rhizobium-ETLI". MICROBIOLOGY-SGM. 141(3):589-595. [doi:10.1099/13500872-141-3-589]
1995ENCARNACION, S, DUNN, M, WILLMS, K, MORA, J. (1995). "Fermentative and aerobic metabolism in Rhizobium etli". Journal Of Bacteriology. 177(11):3058-3066. [doi:10.1128/jb.177.11.3058-3066.1995]7768801
1995GENIAUX, E, FLORES, M, PALACIOS, R, MARTINEZ, E. (1995). "Presence of megaplasmids in Rhizobium tropici and further evidence of differences between the two R. tropici subtypes". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 45(2):392-394. [doi:10.1099/00207713-45-2-392]
1995LOHRKE, S, ORF, J, MARTINEZROMERO, E, SADOWSKY, M. (1995). "HOST-CONTROLLED RESTRICTION OF NODULATION BY Bradyrhizobium-japonicum STRAINS IN SEROGROUP-110". Applied And Environmental Microbiology. 61(6):2378-2383. [doi:10.1128/AEM.61.6.2378-2383.1995]16535054
1995Cárdenas, L, Domínguez, J, Quinto, C, López-Lara, I, Lugtenberg, B, Spaink, H, Rademaker, G, Haverkamp, J, Thomas-Oates, J. (1995). "Isolation, chemical structures and biological activity of the lipo-chitin oligosaccharide nodulation signals from Rhizobium etli". PLANT MOLECULAR BIOLOGY. 29(3):453-464. [doi:10.1007/BF00020977]8534845
1995López-Lara, I, van Der Drift, K, van Brussel, A, Haverkamp, J, Lugtenberg, B, Thomas-Oates, J, Spaink, H. (1995). "Induction of nodule primordia on Phaseolus and Acacia by lipo-chitin oligosaccharide nodulation signals from broad-host-range Rhizobium strain GRH2". PLANT MOLECULAR BIOLOGY. 29(3):465-477. [doi:10.1007/BF00020978]8534846
1995López Lara, I, Orgambide, O, Dazzo, F, Olivares, J, Toro, N. (1995). "Surface polysaccharide mutants of Rhizobium sp. (Acacia) strain GRH2: Major requirement of lipopolysaccharide for successful invasion of Acacia nodules and host range determination". MICROBIOLOGY-SGM. 141(3):573-581. [doi:10.1099/13500872-141-3-573]7711895
1995López Lara, I, van den Berg, J, Thomas-Oates, J, Glushka, J, Lugtenberg, B, Spaink, H. (1995). "Structural identification of the iipo-chitin oligosaccharide nodulation signals of Rhizobium loti". Molecular Microbiology. 15(4):627-638. [doi:10.1111/j.1365-2958.1995.tb02372.x]7783635
1995HERNANDEZLUCAS, I, SEGOVIA, L, MARTINEZROMERO, E, PUEPPKE, S. (1995). "Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L.". Applied And Environmental Microbiology. 61(7):2775-2779. [doi:10.1128/AEM.61.7.2775-2779.1995]7618891
1995HERNANDEZ, G, RAMIREZ, M, SUAREZ, R, FUENTES, S. (1995). "ROOT EXUDED nod-GENE INDUCING SIGNALS LIMIT THE NODULATION CAPACITY OF DIFFERENT ALFALFA VARIETIES WITH Rhizobium-meliloti". PLANT CELL REPORTS. 14(10):626-629. [doi:10.1007/BF00232726]24194309
1995CABALLEROMELLADO, J, FUENTESRAMIREZ, L, REIS, V, MARTINEZROMERO, E. (1995). "GENETIC-STRUCTURE OF Acetobacter-diazotrophicus POPULATIONS AND IDENTIFICATION OF A NEW GENETICALLY DISTANT GROUP". Applied And Environmental Microbiology. 61(8):3008-3013. [doi:10.1128/AEM.61.8.3008-3013.1995]16535102
1995HERNANDEZLUCAS, I, PARDO, M, SEGOVIA, L, MIRANDA, J, MARTINEZROMERO, E. (1995). "Rhizobium tropici chromosomal citrate synthase gene". Applied And Environmental Microbiology. 61(11):3992-3997. [doi:10.1128/aem.61.11.3992-3997.1995]8526514
1995Poupot, R, Martínez Romero, M, Maillet, F, Promé, J. (1995). "Rhizobium tropici nodulation factor sulfation is limited by the quantity of activated form of sulfate". FEBS LETTERS. 368(3):536-540. [doi:10.1016/0014-5793(95)00737-T]7635216
1994Garduño- Juárez, R, Romero, D. (1994). "Heuristic methods in conformational space search of peptides". THEOCHEM-J MOL STRUC. 308(C):115-123. [doi:10.1016/0166-1280(94)80097-9]
1994ROMANOV, V, HERNANDEZLUCAS, I, MARTINEZROMERO, E. (1994). "CARBON METABOLISM ENZYMES OF Rhizobium-tropici CULTURES AND BACTEROIDS". Applied And Environmental Microbiology. 60(7):2339-2342. [doi:10.1128/AEM.60.7.2339-2342.1994]16349319
1994PARDO, M, LAGUNEZ, J, MIRANDA, J, MARTINEZ, E. (1994). "NODULATING ABILITY OF Rhizobium-tropici IS CONDITIONED BY A PLASMID-ENCODED CITRATE SYNTHASE". Molecular Microbiology. 11(2):315-321. [doi:10.1111/j.1365-2958.1994.tb00311.x]8170393
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