Programas instalados en los servidores del CCG y de la LCG


ÁreaSistema Operativo
NombreDescripción corta
ABySS

Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler

Admixture

ADMIXTURE is a software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets.

Adobe Acrobat 9 Standard
Alien_Hunter

Alien_hunter is an application for the prediction of putative Horizontal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs).

AMOS

A Modular, Open-Source whole genome assembler

ANGSD

ANGSD: Analysis of next generation Sequencing Data.

Annocript

Annocript is a pipeline for the annotation of de-novo generated transcriptomes.

Artemis

Visualización y anotación de genomas.

Bcftools

BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed. BCFtools are meant as a faster replacement for most of the perl VCFtools commands.

BEAST

BEAST, Bayesian Evolutionary Analysis Sampling Trees, is a cross-platform program for Bayesian analysis of molecular sequences using MCMC.

Bedtools

bedtools: a powerful toolset for genome arithmetic

BIOBASE

Bases de datos de regulación, señales de transducción y vias metabólicas.

Bioconductor

Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and open development.

BioPerl

Perl code which is useful in biology.

BioPython

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers.