Publications

YearPublicationPMID
2019Delia Basanta, M, Rebollar, E, Parra-Olea, G. (2019). "Potential risk of Batrachochytrium salamandrivorans in Mexico". Plos One. 14(2):e0211960-. [doi:10.1371/journal.pone.0211960]30753218
2019Elizalde-Díaz JP, Hernández-Lucas I, Medina-Aparicio L, Dávalos A, Leija A, Alvarado-Affantranger X, García-García JD, Hernández G, Garcia-de Los Santos A. (2019). "Rhizobium tropici CIAT 899 copA gene plays a fundamental role in copper tolerance in both free life and symbiosis with Phaseolus vulgaris.". MICROBIOLOGY-SGM. ():-. [doi:10.1099/mic.0.000803]31081746
2019Bolaños LM, Rosenblueth M, Manrique de Lara A, Migueles-Lozano A, Gil-Aguillón C, Mateo-Estrada V, González-Serrano F, Santibáñez-López CE, García-Santibáñez T, Martínez-Romero E. (2019). "Cophylogenetic analysis suggests cospeciation between the Scorpion Mycoplasma Clade symbionts and their hosts". Plos One. 14(1):e0209588-. [doi:10.1371/journal.pone.0209588]30625167
2019Santos-Zavaleta, A, Salgado, H, Gama-Castro, S, Sánchez-Pérez, M, Gómez-Romero, L, Ledezma-Tejeida, D, García-Sotelo, J, Alquicira-Hernández, K, Muñiz-Rascado, L, Peña-Loredo, P, Ishida-Gutiérrez, C, Velázquez-Ramírez, D, Del Moral-Chávez, V, Bonavides-Martínez, C, Méndez-Cruz, C, Galagan, J, Collado-Vides, J. (2019). "RegulonDB v 10.5: tackling challenges to unify classic and high throughput knowledge of gene regulation in E. coli K-12". Nucleic Acids Research. 47(D1):212-220. [doi:10.1093/nar/gky1077]30395280
2019Hidalgo-Garcia, A, Torres, M, Sales, A, Bedmar, E, Girard, L, Delgado, M. (2019). "Rhizobium etli Produces Nitrous Oxide by Coupling the Assimilatory and Denitrification Pathways". Frontiers in Microbiology. 10():980-980. [doi:10.3389/fmicb.2019.00980]31134023
2019Campos AI, Freyre-González JA. (2019). "Evolutionary constraints on the complexity of genetic regulatory networks allow predictions of the total number of genetic interactions.". SCIENTIFIC REPORTS. 9(1):3618-3618. [doi:10.1038/s41598-019-39866-z]30842463
2019Mancilla-Rojano J, Castro-Jaimes S, Ochoa SA, Bobadilla Del Valle M, Luna-Pineda VM, Bustos P, Laris-González A, Arellano-Galindo J, Parra-Ortega I, Hernández-Castro R, Cevallos MA, Xicohtencatl-Cortes J, Cruz-Córdova A. (2019). "Whole-Genome Sequences of Five Acinetobacter baumannii Strains From a Child With Leukemia M2". Frontiers in Microbiology. 10():132-132. [doi:10.3389/fmicb.2019.00132]30787915
2019Bustamante-Brito R, Vera-Ponce de León A, Rosenblueth M, Martínez-Romero JC, Martínez-Romero E. (2019). "Metatranscriptomic Analysis of the Bacterial Symbiont Dactylopiibacterium carminicum from the Carmine Cochineal Dactylopius coccus (Hemiptera: Coccoidea: Dactylopiidae).". Life. 9(1):-. [doi:10.3390/life9010004]30609847
2019Alonso-Bastida, R, Encarnación-Guevara, S. (2019). "Proteomic insights into lysine acetylation and the implications for medical research". EXPERT REV PROTEOMIC. 16(1):1-3. [doi:10.1080/14789450.2019.1557050]30523736
2019Luis Folch-Mallol, J, Zarate, A, Sanchez-Reyes, A, Lopez-Lara, I. (2019). "Expression, purification, and characterization of a metagenomic thioesterase from activated sludge involved in the degradation of acylCoA-derivatives". PROTEIN EXPRES PURIF. 159():49-52. [doi:10.1016/j.pep.2019.03.008]30905871
2019Rioualen, C, Charbonnier-Khamvongsa, L, Collado-Vides, J, van Helden, J. (2019). "Integrating Bacterial ChIP-seq and RNA-seq Data With SnakeChunks.". Current Protocols in Bioinformatics. 66(1):e72-. [doi:10.1002/cpbi.72]30786165
2019Hernández-Rodríguez, D, Vásquez-Aguilar, A, Serio-Silva, J, Rebollar, E, Azaola-Espinosa, A. (2019). "Molecular detection of Bifidobacterium spp. in faeces of black howler monkeys (Alouatta pigra)". J MED PRIMATOL. 48(2):99-105. [doi:10.1111/jmp.12395]30520095
2019Vicens, A, Vinuesa, P, Arenas, M, Treviño, C. (2019). "Analyzing the functional divergence of Slo1 and Slo3 channel subfamilies". Molecular Phylogenetics And Evolution. 133():33-41. [doi:10.1016/j.ympev.2018.12.026]30586650
2019Kueneman, J, Bletz, M, McKenzie, V, Becker, C, Joseph, M, Abarca, J, Archer, H, Arellano, A, Bataille, A, Becker, M, Belden, L, Crottini, A, Geffers, R, Haddad, C, Harris, R, Holden, W, Hughey, M, Jarek, M, Kearns, P, Kerby, J, Kielgast, J, Kurabayashi, A, Longo, A, Loudon, A, Medina, D, Nuñez, J, Perl, R, Pinto-Tomás, A, Rabemananjara, F, Rebollar, E, Rodríguez, A, Rollins-Smith, L, Stevenson, R, Tebbe, C, Vargas Asensio, G, Waldman, B, Walke, J, Whitfield, S, Zamudio, K, Zúñiga Chaves, I, Woodhams, D, Vences, M. (2019). "Community richness of amphibian skin bacteria correlates with bioclimate at the global scale". Nature Ecology & Evolution. 3(3):381-389. [doi:10.1038/s41559-019-0798-1]30778181
2019López-Carmona, D, Alarcón, A, Martínez-Romero, E, Peña-Cabriales, J, Larsen, J. (2019). "Maize plant growth response to whole rhizosphere microbial communities in different mineral N and P fertilization scenarios". Rhizosphere. 9():38-46. [doi:10.1016/j.rhisph.2018.11.004]
2019Sánchez-Cruz, R, Tpia Vázquez, I, Batista-García, R, Méndez-Santiago, E, Sánchez-Carbente, M, Leija, A, Lira-Ruan, V, Hernández, G, Wong-Villarreal, A, Folch-Mallol, J. (2019). "Isolation and characterization of endophytes from nodules of Mimosa pudica with biotechnological potential". Microbiological Research. 218():76-86. [doi:10.1016/j.micres.2018.09.008]30454661
2019Castillo-Ramírez S, Graña-Miraglia L. (2019). "Inaccurate multilocus sequence typing of Acinetobacter baumannii". EMERG INFECT DIS. 25(1):186-187. [doi:10.3201/eid2501.180374]30561303
2019Lithgow-Serrano, O, Collado-Vides, J. (2019). "In the pursuit of semantic similarity for literature on microbial transcriptional regulation". J INTELL FUZZY SYST. 36(5):4777-4786. [doi:10.3233/JIFS-179026]
2018Zepeda Mendoza, M, Roggenbuck, M, Manzano Vargas, K, Hansen, L, Brunak, S, Gilbert, M, Sicheritz-Pontén, T. (2018). "Protective role of the vulture facial skin and gut microbiomes aid adaptation to scavenging". Acta Veterinaria Scandinavica. 60(1):61-61. [doi:10.1186/s13028-018-0415-3]30309375
2018Ayra, L, Ramírez, M, Íñiguez, L, Rodés, R, Ortega, E, Hernández, G. (2018). "The common bean (Phaseolus vulgaris) basic leucine zipper (bZIP) transcription factor family: Response to salinity stress in fertilized and symbiotic N2-fixing plants". Agriculture (switzerland). 8(10):160-. [doi:10.3390/agriculture8100160]
2018Sandner-Miranda, L, Vinuesa, P, Cravioto, A, Morales-Espinosa, R. (2018). "The genomic basis of intrinsic and acquired antibiotic resistance in the genus Serratia". Frontiers in Microbiology. 9(MAY):828-828. [doi:10.3389/fmicb.2018.00828]29867787
2018Martin-Rodriguez, J, Leija, A, Formey, D, Hernandez, G. (2018). "The MicroRNA319d/TCP10 Node Regulates the Common Bean - Rhizobia Nitrogen-Fixing Symbiosis". Frontiers In Plant Science. 9():1175-1175. [doi:10.3389/fpls.2018.01175]30147704
2018Conde-Álvarez R, Palacios-Chaves L, Gil-Ramírez Y, Salvador-Bescós M, Bárcena-Varela M, Aragón-Aranda B, Martínez-Gómez E, Zúñiga-Ripa A, de Miguel MJ, Bartholomew TL, Hanniffy S, Grilló MJ, Vences-Guzmán MÁ, Bengoechea JA, Arce-Gorvel V, Gorvel JP, Moriyón I, Iriarte M. (2018). "Identification of lptA, lpxE, and lpxO, three genes involved in the remodeling of Brucella cell envelope". Frontiers in Microbiology. 8(JAN):2657-2657. [doi:10.3389/fmicb.2017.02657]29375522
2018Rosenblueth, M, Ormeno-Orrillo, E, Lopez-Lopez, A, Rogel, M, Reyes-Hernandez, B, Martinez-Romero, J, Reddy, P, Martinez-Romero, E. (2018). "Nitrogen Fixation in Cereals". Frontiers in Microbiology. 9():1794-1794. [doi:10.3389/fmicb.2018.01794]30140262
2018Ormeño-Orrillo E, Rogel MA, Zúñiga-Dávila D, Martínez-Romero E. (2018). "Complete genome sequence of the symbiotic strain Bradyrhizobium icense LMTR 13T, isolated from lima bean (Phaseolus lunatus) in Peru". Genome Announcements. 6(10):e00146-18-. [doi:10.1128/genomeA.00146-18]29519840
2018Paik, Y, Lane, L, Kawamura, T, Chen, Y, Cho, J, Labaer, J, Yoo, J, Domont, G, Corrales, F, Omenn, G, Archakov, A, Encarnación-Guevara, S, Lui, S, Salekdeh, G, Cho, J, Kim, C, Overall, C. (2018). "Launching the C-HPP neXt-CP50 Pilot Project for Functional Characterization of Identified Proteins with No Known Function". J PROTEOME RES. 17(12):4042-4050. [doi:10.1021/acs.jproteome.8b00383]30269496
2018Hölzl G, Sohlenkamp C, Vences-Guzmán MA, Gisch N. (2018). "Headgroup hydroxylation by OlsE occurs at the C4 position of ornithine lipid and is widespread in proteobacteria and bacteroidetes.". CHEM PHYS LIPIDS. 213():32-38. [doi:10.1016/j.chemphyslip.2018.03.002]29524395
2018Aguilar, C, Martinez-Batallar, G, Flores, N, Moreno-Avitia, F, Encarnacion, S, Escalante, A, Bolivar, F. (2018). "Analysis of differentially upregulated proteins in ptsHIcrr(-) and rppH(-) mutants in Escherichia coli during an adaptive laboratory evolution experiment". Applied Microbiology And Biotechnology. 102(23):10193-10208. [doi:10.1007/s00253-018-9397-3]30284012
2018Matus-Acuña, V, Caballero-Flores, G, Reyes-Hernandez, B, Martinez-Romero, E. (2018). "Bacterial preys and commensals condition the effects of bacteriovorus nematodes on Zea mays and Arabidopsis thaliana". APPLIED SOIL ECOLOGY. 132():99-106. [doi:10.1016/j.apsoil.2018.08.012]
2018Barreto-Curiel, F, Ramirez-Puebla, S, Ringø, E, Escobar-Zepeda, A, Godoy-Lozano, E, Vazquez-Duhalt, R, Sanchez-Flores, A, Viana, M. (2018). "Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi". Animal Feed Science and Technology. 245():91-103. [doi:10.1016/j.anifeedsci.2018.09.002]
2018Casasola-Rodriguez, B, Ruiz-Palacios, G, Pilar, R, Losano, L, Ignacio, M, Orta de Velasquez, M. (2018). "Detection of VBNC Vibrio cholerae by RT-Real Time PCR based on differential gene expression analysis". Fems Microbiology Letters. 365(15):-. [doi:10.1093/femsle/fny156]29961811
2018Conde, R, de la Rosa Diego, P, Luis, L, Salgado Homero, H, Karina, R, Edmundo, R, Bernardo, S. (2018). "Antibiotic Resistance and Potential Pathogenicity of an Isolate Salmonella enterica enterica Based on Genomic Comparison with of 103 and 2199 Strains Obtained from Contaminated Chicken Meat in Mexico". Advances In Microbiology. 8(7):465-475. [doi:10.4236/aim.2018.87031]
2018Guevara-Luna, J, Alvarez-Fitz, P, Ríos-Leal, E, Acevedo-Quiroz, M, Encarnación-Guevara, S, Moreno-Godinez, M, Castellanos-Escamilla, M, Toribio-Jiménez, J, Romero-Ramírez, Y. (2018). "Biotransformation of benzo[a]pyrene by the thermophilic bacterium Bacillus licheniformis M2-7". World Journal Of Microbiology & Biotechnology. 34(7):88-. [doi:10.1007/s11274-018-2469-9]29886516
2018Montes-Grajales, D, Martinez-Romero, E, Olivero-Verbel, J. (2018). "Phytoestrogens and mycoestrogens interacting with breast cancer proteins". Steroids. 134():9-15. [doi:10.1016/j.steroids.2018.03.010]29608946
2018Guzmán-Flores JM, Flores-Pérez EC, Hernández-Ortiz M, Vargas-Ortiz K, Ramírez-Emiliano J, Encarnación-Guevara S, Pérez-Vázquez V. (2018). "Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis". Biomolecules. 8(2):35-. [doi:10.3390/biom8020035]29857581
2018López-Lara, I, Nogales, J, Pech-Canul, Á, Calatrava-Morales, N, Bernabéu-Roda, L, Durán, P, Cuéllar, V, Olivares, J, Alvarez, L, Palenzuela-Bretones, D, Romero, M, Heeb, S, Cámara, M, Geiger, O, Soto, M. (2018). "2-Tridecanone impacts surface-associated bacterial behaviours and hinders plant–bacteria interactions". Environmental Microbiology. 20(6):2049-2065. [doi:10.1111/1462-2920.14083]29488306
2018González-Sánchez A, Cubillas CA, Miranda F, Dávalos A, García-de Los Santos A. (2018). "The ropAe gene encodes a porin-like protein involved in copper transit in Rhizobium etli CFN42". MICROBIOLOGYOPEN. 7(3):e00573-. [doi:10.1002/mbo3.573]29280343
2018Vinuesa, P, Ochoa-Sánchez, L, Contreras-Moreira, B. (2018). "GET_PHYLOMARKERS, a software package to select optimal orthologous clusters for phylogenomics and inferring pan-genome phylogenies, used for a critical geno-taxonomic revision of the genus Stenotrophomonas". Frontiers in Microbiology. 9(MAY):771-771. [doi:10.3389/fmicb.2018.00771]29765358
2018Stefan, A, Van Cauwenberghe, J, Rosu, C, Stedel, C, Labrou, N, Flemetakis, E, Efrose, R. (2018). "Genetic diversity and structure of Rhizobium leguminosarum populations associated with clover plants are influenced by local environmental variables". Systematic And Applied Microbiology. 41(3):251-259. [doi:10.1016/j.syapm.2018.01.007]29452714
2018Rodriguez-Beltran, J, Hernandez-Beltran, J, Delafuente, J, Escudero, J, Fuentes-Hernandez, A, MacLean, R, Peña-Miller, R, San Millan, A. (2018). "Multicopy plasmids allow bacteria to escape from fitness trade-offs during evolutionary innovation". Nature Ecology & Evolution. 2(5):873-881. [doi:10.1038/s41559-018-0529-z]29632354
2018Frisch MB, Castillo-Ramirez S, Petit RA 3rd, Farley MM, Ray SM, Albrecht VS, Limbago BM, Hernandez J, See I, Satola SW, Read TD. (2018). "Invasive methicillin-resistant Staphylococcus aureus USA500 strains from the U.S. Emerging Infections Program constitute three geographically distinct lineages". mSphere. 3(3):e00571-17-. [doi:10.1128/mSphere.00571-17]29720528
2018Zepeda Mendoza, M, Xiong, Z, Escalera-Zamudio, M, Runge, A, Thézé, J, Streicker, D, Frank, H, Loza-Rubio, E, Liu, S, Ryder, O, Samaniego Castruita, J, Katzourakis, A, Pacheco, G, Taboada, B, Löber, U, Pybus, O, Li, Y, Rojas-Anaya, E, Bohmann, K, Carmona Baez, A, Arias, C, Liu, S, Greenwood, A, Bertelsen, M, White, N, Bunce, M, Zhang, G, Sicheritz-Pontén, T, Gilbert, M. (2018). "Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat". Nature Ecology & Evolution. 2(4):659-668. [doi:10.1038/s41559-018-0476-8]29459707
2018Becerra-Rivera, V, Bergström, E, Thomas-Oates, J, Dunn, M. (2018). "Polyamines are required for normal growth in Sinorhizobium meliloti". MICROBIOLOGY-SGM. 164(4):600-613. [doi:10.1099/mic.0.000615]29619919
2018Blanc, C, Coluccia, F, L'Haridon, F, Torres, M, Ortiz-Berrocal, M, Stahl, E, Reymond, P, Schreiber, L, Nawrath, C, Metraux, J, Serrano, M. (2018). "The cuticle mutant eca2 modifies plant defense responses to biotrophic and necrotrophic pathogens and herbivory insects". Molecular Plant-Microbe Interactions. 31(3):344-355. [doi:10.1094/MPMI-07-17-0181-R]29130376
2018Kumar, K, Mahendhiran, M, Casales Diaz, M, Hernandez-Como, N, Hernandez-Eligio, A, Torres-Torres, G, Godavarthi, S, Martinez Gomez, L. (2018). "Green synthesis of Ce3+ rich CeO2 nanoparticles and its antimicrobial studies". MATERIALS LETTERS. 214():15-19. [doi:10.1016/j.matlet.2017.11.097]
2018Chen, L, Mendez-Garcia, C, Dombrowski, N, Servin-Garciduenas, L, Eloe-Fadrosh, E, Fang, B, Luo, Z, Tan, S, Zhi, X, Hua, Z, Martinez-Romero, E, Woyke, T, Huang, L, Sanchez, J, Isabel Pelaez, A, Ferrer, M, Baker, B, Shu, W. (2018). "Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota". ISME JOURNAL. 12(3):756-775. [doi:10.1038/s41396-017-0002-z]29222443
2018Salgado, H, Martínez-Flores, I, Bustamante, V, Alquicira-Hernández, K, García-Sotelo, J, García-Alonso, D, Collado-Vides, J. (2018). "Using RegulonDB, the Escherichia coli K-12 Gene Regulatory Transcriptional Network Database.". Current Protocols in Bioinformatics. 61(1):1321-13230. [doi:10.1002/cpbi.43]30040192
2018Geiger, O, Padilla Gómez, J, López Lara, I. (2018). "Bacterial sphingolipids and sulfonolipids.". Biogenesis of Fatty Acids, Lipids and Membranes. ():273-289. [doi:10.1007/978-3-319-50430-8_12]
2018Julieta Solis-Gonzalez, C, Dominguez-Malfavon, L, Vargas-Suarez, M, Gaytan, I, Angel Cevallos, M, Lozano, L, Javier Cruz-Gomez, M, Loza-Tavera, H. (2018). "Novel metabolic pathway for N-methylpyrrolidone degradation in Alicycliphilus sp. strain BQ1". Applied And Environmental Microbiology. 84(1):e02136-17-. [doi:10.1128/AEM.02136-17]29030443
2018Martinez-Romero, E, Rodriguez-Medina, N, Beltran-Rojel, M, Silva-Sanchez, J, Barrios-Camacho, H, Perez-Rueda, E, Garza-Ramos, U. (2018). "Genome misclassification of Klebsiella variicola and Klebsiella quasipneumoniae isolated from plants, animals and humans". Salud Publica De Mexico. 60(1):56-62. [doi:10.21149/8149]29689657
2018Sahonero Canavesi, D, López Lara, I, Geiger, O. (2018). "Membrane lipid degradation and lipid cycles in microbes.". Aerobic Utilization of Hydrocarbons, Oils and Lipids. ():1-24. [doi:10.1007/978-3-319-39782-5_38-1]
2018Geiger, O, Sohlenkamp, C, López Lara, I. (2018). "Formation of bacterial glycerol-based membrane lipids: pathways, enzymes, reactions.". Biogenesis of Fatty Acids, Lipids and Membranes. ():87-107. [doi:10.1007/978-3-319-50430-8_8]
2018López Lara, I, Soto Misffut, M. (2018). "Fatty acid synthesis and regulation". Biogenesis of Fatty Acids, Lipids and Membranes. ():3-23. [doi:10.1007/978-3-319-50430-8_2]
2018Rosenblueth, M, Martinez, J, Ramirez-Puebla, S, Vera-Ponce de León, A, Rosas-Perez, T, Bustamante-Brit, R, Rincón-Rosales, R, Martinez-Romero, E. (2018). "Endosymbiotic microorganisms of scale insects". TIP Revista Especializada en Ciencias Químico-Biológicas. 21(1):53-69. [doi:10.1016/j.recqb.2017.08.006]
2018López Lara, I, Geiger, O. (2018). "Formation of fatty acids". Biogenesis of Fatty Acids, Lipids and Membranes. ():44-55. [doi:10.1007/978-3-319-50430-8_5]
2018Martinez-Romero, E, Rodriguez-Medina, N, Beltran-Rojel, M, Toribio-Jimenez, J, Garza-Ramos, U. (2018). "Klebsiella variicola and Klebsiella quasipneumoniae with capacity to adapt to clinical and plant settings". Salud Publica De Mexico. 60(1):29-40. [doi:10.21149/8156]29689654
2017Rosas-Pérez, T, Dunn, M, Martínez-Romero, E. (2017). "The Symbiome of Llaveia Cochineals (Hemiptera: Coccoidea: Monophlebidae) Includes a Gammaproteobacterial Cosymbiont Sodalis TME1 and the Known Candidatus Walczuchella monophlebidarum". Insect Physiology and Ecology. ():115-134. [doi:10.5772/66442]
2017Freyre-González, J, Tauch, A. (2017). "Functional architecture and global properties of the Corynebacterium glutamicum regulatory network: Novel insights from a dataset with a high genomic coverage". JOURNAL OF BIOTECHNOLOGY. 257():199-210. [doi:10.1016/j.jbiotec.2016.10.025]27829123
2017Aragon, W, Juan Reina-Pinto, J, Serrano, M. (2017). "The intimate talk between plants and microorganisms at the leaf surface". Journal Of Experimental Botany. 68(19):5339-5350. [doi:10.1093/jxb/erx327]29136456
2017Moreno-Avitia, F, Lozano, L, Utrilla, J, Bolívar, F, Escalante, A. (2017). "Draft genome sequence of pseudomonas chlororaphis ATCC 9446, a nonpathogenic bacterium with bioremediation and industrial potential". Genome Announcements. 5(23):e00474-17-. [doi:10.1128/genomeA.00474-17]28596401
2017Pérez-Oseguera Á, Castro-Jaimes S, Salgado-Camargo AD, Silva-Sanchez J, Garza-González E, Castillo-Ramírez S, Cevallos MÁ. (2017). "Complete genome sequence of a blaOXA-58-producing Acinetobacter baumannii strain isolated from a Mexican hospital". Genome Announcements. 5(36):e00949-17-. [doi:10.1128/genomeA.00949-17]28883144
2017Hernandez-Vargas, M, Gil, J, Lozano, L, Pedraza-Escalona, M, Ortiz, E, Encarnacion-Guevara, S, Alagon, A, Corzo, G. (2017). "Proteomic and transcriptomic analysis of saliva components from the hematophagous reduviid Triatoma Pallidipennis". Journal Of Proteomics. 162():30-39. [doi:10.1016/j.jprot.2017.04.022]28442446
2017Gil, J, Ramirez-Torres, A, Encarnacion-Guevara, S. (2017). "Lysine acetylation and cancer: A proteomics perspective". Journal Of Proteomics. 150():297-309. [doi:10.1016/j.jprot.2016.10.003]27746255
2017Degli Esposti M, Martinez Romero E. (2017). "The functional microbiome of arthropods". Plos One. 12(5):e0176573-. [doi:10.1371/journal.pone.0176573]28475624
2017Gil J, Ramírez-Torres A, Chiappe D, Luna-Peñaloza J, Fernandez-Reyes FC, Arcos-Encarnación B, Contreras S, Encarnación-Guevara S. (2017). "Lysine acetylation stoichiometry and proteomics analyses reveal pathways regulated by sirtuin 1 in human cells". JOURNAL OF BIOLOGICAL CHEMISTRY. 292(44):18129-18144. [doi:10.1074/jbc.M117.784546]28893905
2017Ledezma-Tejeida D, Ishida C, Collado-Vides J. (2017). "Genome-wide mapping of transcriptional regulation and metabolism describes information-processing units in Escherichia coli". Frontiers in Microbiology. 8(AUG):1466-1466. [doi:10.3389/fmicb.2017.01466]28824593
2017Romero-Gutierrez, T, Peguero-Sanchez, E, Cevallos, M, Batista, C, Ortiz, E, Possani, L. (2017). "A Deeper Examination of Thorellius Atrox Scorpion Venom Components with Omic Techonologies". Toxins. 9(12):399-. [doi:10.3390/toxins9120399]29231872
2017Marin, R, Cortez, D, Lamanna, F, Pradeepa, M, Leushkin, E, Julien, P, Liechti, A, Halbert, J, Brüning, T, Mössinger, K, Trefzer, T, Conrad, C, Kerver, H, Wade, J, Tschopp, P, Kaessmann, H. (2017). "Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage". GENOME RESEARCH. 27(12):1974-1987. [doi:10.1101/gr.223727.117]29133310
2017López-Lara, I, Geiger, O. (2017). "Bacterial lipid diversity". Biochimica Et Biophysica Acta-Molecular And Cell Biology Of Lipids. 1862(11):1287-1299. [doi:10.1016/j.bbalip.2016.10.007]27760387
2017Olvera, C, Santamaría, R, Bustos, P, Vallejo, C, Montor, J, Wacher, C, Munguia, A. (2017). "Draft genome sequence of Leuconostoc citreum CW28 isolated from pozol, a pre-Hispanic fermented corn beverage". Genome Announcements. 5(48):e01283-17-. [doi:10.1128/genomeA.01283-17]
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2013Ormeño Orrillo, E, Martínez Romero, M. (2013). "Phenotypic tests in Rhizobium species description: An opinion and (a sympatric speciation) hypothesis". Systematic And Applied Microbiology. 36(3):145-147. [doi:10.1016/j.syapm.2012.11.009]23415482
2013Couillerot, O, Ramírez Trujillo, J, Walker, V, von Felten, A, Jansa, J, Maurhofer, M, Defago, G, Prigent-Combaret, C, Comte, G, Caballero Mellado, J, Moenne-Loccoz, Y. (2013). "Comparison of prominent Azospirillum strains in Azospirillum-pseudomonas-Glomus consortia for promotion of maize growth". Applied Microbiology And Biotechnology. 97(10):4639-4649. [doi:10.1007/s00253-012-4249-z]22805783
2013Ramírez Yáñez, M, Flores-Pacheco, G, Reyes, J, Álvarez, A, Drevon, J, Girard Cuesy, M, Hernández Delgado, G. (2013). "Two Common Bean Genotypes with Contrasting Response to Phosphorus Deficiency Show Variations in the microRNA 399-Mediated PvPHO2 Regulation within the PvPHR1 Signaling Pathway". International Journal Of Molecular Sciences. 14(4):8328-8344. [doi:10.3390/ijms14048328]23591845
2013Geiger, O, Lopez-Lara, I, Sohlenkamp, C. (2013). "Phosphatidylcholine biosynthesis and function in bacteria". Biochimica Et Biophysica Acta-Molecular And Cell Biology Of Lipids. 1831(3):503-513. [doi:10.1016/j.bbalip.2012.08.009]22922101
2013Vences Guzmán, M, Guan, Z, Bermúdez Barrientos, J, Geiger, O, Sohlenkamp, C. (2013). "Agrobacteria lacking ornithine lipids induce more rapid tumour formation". Environmental Microbiology. 15(3):895-906. [doi:10.1111/j.1462-2920.2012.02867.x]22958119
2013Servín Garcidueñas, L, Peng X., Garrett R.A., Martínez Romero, M. (2013). "Genome sequence of a novel archaeal fusellovirus assembled from the metagenome of a Mexican hot spring". Genome Announcements. 1(2):e00164-13-. [doi:10.1128/genomeA.00164-13]23618716
2013López López, A, Negrete-Yankelevich, S, Rogel Hernández, M, Ormeño Orrillo, E, Martínez Romero, J, Martínez Romero, M. (2013). "Native bradyrhizobia from Los Tuxtlas in Mexico are symbionts of Phaseolus lunatus (Lima bean)". Systematic And Applied Microbiology. 36(1):33-38. [doi:10.1016/j.syapm.2012.10.006]23280323
2013Frausto-Solis, J, Sanchez-Perez, M, Linan-Garcia, E, Paulo Sanchez-Hernandez, J, Ramachandran, M. (2013). "Cluster Perturbation Simulated Annealing for Protein Folding Problem". JOURNAL OF UNIVERSAL COMPUTER SCIENCE. 19(15):2207-2223.
2013Castillo-Ramírez, S, Feil, E. (2013). "Population genetics". The Prokaryotes: Prokaryotic Biology And Symbiotic Associations. ():255-266. [doi:10.1007/978-3-642-30194-0_83]
2013Yessica, G, Alejandro, A, Ronald, F, José, A, Esperanza, M, Samuel, C, Remedios, M, Ormeño Orrillo, E. (2013). "Tolerance, growth and degradation of phenanthrene and benzo[a]pyrene by Rhizobium tropici CIAT 899 in liquid culture medium". APPLIED SOIL ECOLOGY. 63():105-111. [doi:10.1016/j.apsoil.2012.09.010]
2013Pérez Segura, G, Pérez Oseguera, M, Cevallos Gaos, M. (2013). "The repAC replication system of the Rhizobium leguminosarum pRL7 plasmid is functional: Implications regarding the origin and evolution of repABC plasmids". Plasmid. 69(1):49-57. [doi:10.1016/j.plasmid.2012.08.003]22975386
2013Salgado Osorio, H, Peralta Gil, M, Gama Castro, M, Santos Zavaleta, A, Muñíz Rascado, L, Garcia Sotelo, J, Weiss, V, Solano Lira, H, Martínez Flores, I, Medina Rivera, A, Salgado Osorio, G, Alquicira Hernández, S, Alquicira Hernández, K, López Fuentes, A, Porrón Sotelo, L, Huerta Moreno, A, Bonavides Martínez, C, Balderas MartÍnez, Y, Pannier, L, Olvera, M, Labastida, A, Jiménez-Jacinto, V, Vega-Alvarado, L, del Moral Chávez, V, Hernández Álvarez, A, Morett, E, Collado Vides, P. (2013). "RegulonDB v8.0: Omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more". Nucleic Acids Research. 41(D1):203-213. [doi:10.1093/nar/gks1201]23203884
2013Ferrera-Rodríguez, O, Greer, C, Juck, D, Consaul, L, Martínez Romero, M, Whyte, L. (2013). "Hydrocarbon-degrading potential of microbial communities from Arctic plants". Journal Of Applied Microbiology. 114(1):71-83. [doi:10.1111/jam.12020]22984892
2013Keseler, I, Mackie, A, Peralta Gil, M, Santos Zavaleta, A, Gama Castro, M, Bonavides Martínez, C, Fulcher, C, Huerta Moreno, A, Kothari, A, Krummenacker, M, Latendresse, M, Muñíz Rascado, L, Ong, Q, Paley, S, Schroder, I, Shearer, A, Subhraveti, P, Travers, M, Weerasinghe, D, Weiss, V, Collado Vides, P, Gunsalus, R, Paulsen, I, Karp, P. (2013). "EcoCyc: Fusing model organism databases with systems biology". Nucleic Acids Research. 41(D1):605-612. [doi:10.1093/nar/gks1027]23143106
2013Martínez Aguilar, L, Caballero Mellado, J, Estrada De Los Santos, P. (2013). "Transfer of Wautersia Numazuensis to the genus Cupriavidus as Cupriavidus Numazuensis comb. nov.". International Journal Of Systematic And Evolutionary Microbiology. 63(1):208-211. [doi:10.1099/ijs.0.038729-0]22389284
2013Ramírez Puebla, S, Servín Garcidueñas, L, Jiménez Marín, L, Bolaños Avellaneda, L, Rosenblueth Laguette, M, Martínez Romero, J, Rogel Hernández, M, Ormeño Orrillo, E, Martínez Romero, M. (2013). "Gut and root microbiota commonalities". Applied And Environmental Microbiology. 79(1):2-9. [doi:10.1128/AEM.02553-12]23104406
2013Martínez Romero, M. (2013). "Los Biofertilizantes y su uso en la Agricultura. SAGARPA-COFUPRO-UNAM". Manual teórico-práctico. ():47-.
2013Palacios de la Lama, R, Palacios Flores, K, Flores López, M. (2013). "REARRANGEMENTS". Brenners Encyclopedia of Genetics. 6():44-46.
2013Ormeño Orrillo, E, Hungria, M, Martínez Romero, M. (2013). "The Prokaryotes?Prokaryotic Physiology and Biochemistry". Capítulo 11 Dinitrogen fixing prokaryotes. ():-.
2013da Silva, M, Santos, D, de Lyra, M, Mondragon-Jacobo, C, Martinez-Romero, E. (2013). "Isolation and molecular characterization of endophytic bacteria associated with forage cactus (Opuntia spp.)". Acta Horticulturae. 995():99-108. [doi:10.17660/ActaHortic.2013.995.12]
2013López Guerrero, M, Ramírez Romero, M, Martínez Romero, M. (2013). "Rhizobial genetic repertoire to inhabit legume and nonlegume rhizospheres". Molecular Microbial Ecology of the Rhizosphere. 1():495-500.
2013Navarro-Noya, Y, Martínez Romero, M, Hernández-Rodríguez, C. (2013). "Potential plant-growth-promoting and nitrogen-fixing bacteria associated with pioneer plants growing on mine tailings". Molecular Microbial Ecology of the Rhizosphere. 2():1003-1011.
2013Servín Garcidueñas, L, Garrett R.A., Amils R., Martínez Romero, M. (2013). "Genome sequence of the acidophilic bacterium Acidocella sp. strain MX-AZ02". Genome Announcements. 1(1):e00041-12-. [doi:10.1128/genomeA.00041-12]23405365
2013Galindo Fentanes, E, Sánchez Castillo, J, Calva Mercado, E, Cuevas García, S, Davis Martínez, O, Larralde Ridaura, H, Iturriaga de la Fuente, G, Hernández Delgado, G. (2013). "La Ciencia desde Morelos para el Mundo Tomo III: Química, Física y Matemáticas". La Unión de Morelos. ():-.
2013Reddy, P, Altúzar Molina, A, Ortíz Berrocal, M, Medina-Andrés, R, López Sámano, M, Martínez Aguilar, L, Velázquez Hernández, M. (2013). "Predisposition and Redesigning of Genetic Networks of Rice for Accommodating Nitrogen-Fixing Rhizobial Symbiosis". Muralidharan K and Siddiq EA. ():245-257.
2013de Luna, L, León, P, Encarnación Guevara, S, Guevara-García, A. (2013). "Chloroplast omics". Barh Delmya. ():-.
2013Gutiérrez-Román, M, Dunn, M, Tinoco-Valencia, F, Holguín-Meléndez, K, Guillen Navarro, G, Huerta-Palacios, G. (2013). "Antifungal activity of chitinases (chiA, chiC and chiB) produced by Serratia marcescens CFFSUR-B2 against Mycosphaerella Fijiensis causal agent of black sigatoka in banana (Musa spp.)". Acta Phytopathol. 43():96-.
2013Palacios de la Lama, R, Flores López, M, Palacios Flores, K. (2013). "DNA AMPLIFICATION in vivo". Brenners Encyclopedia of Genetics. 2():341-343.
2012López-Ortiz, C, Ferrera-Cerrato, R, Alarcón, A, Almaraz, J, Martinez-Romero, E, Mendoza-López, M. (2012). "Establishment and physiological responses of symbiosis Rhizobium tropici-Leucaena leucocephala in presence of phenanthrene and naphthalene". REVISTA INTERNACIONAL DE CONTAMINACION AMBIENTAL. 28(4):333-342.
2012Escalera-Zamudio, M, Cobian-Guemes, G, Soto-del Río, M, Isa, P, Sánchez-Betancourt, I, Parissi-Crivelli, A, Martinez-Cazares, M, Romero, P, Velázquez-Salinas, L, Huerta-Lozano, B, Nelson, M, Montero, H, Vinuesa Fleischmann, P, López, S, Arias, C. (2012). "Characterization of an influenza A virus in Mexican swine that is related to the A/H1N1/2009 pandemic clade". Virology. 433(1):176-182. [doi:10.1016/j.virol.2012.08.003]22921315
2012Formey, D, Jourda, C, Roux, C, Delaux, P. (2012). "What the Genomics of Arbuscular Mycorrhizal Symbiosis Teaches Us about Root Development". Root Genomics And Soil Interactions. ():171-188. [doi:10.1002/9781118447093.ch9]
2012Silvente Keller, S, Sobolev, A, Lara Flores, M. (2012). "Metabolite Adjustments in Drought Tolerant and Sensitive Soybean Genotypes in Response to Water Stress". Plos One. 7(6):38554-. [doi:10.1371/journal.pone.0038554]22685583
2012Servín Garcidueñas, L, Martínez Romero, M. (2012). "Complete mitochondrial and plastid genomes of the green microalga Trebouxiophyceae sp. strain MX-AZ01 isolated from a highly acidic geothermal lake". Eukaryotic cell. 11(11):1417-1418. [doi:10.1128/EC.00244-12]23104370
2012Pauling, J, Rottger, R, Neuner, A, Salgado Osorio, H, Collado Vides, P, Kalaghatgi, P, Azevedo, V, Tauch, A, Puhlerg, A, Baumbach, J. (2012). "On the trail of EHEC/EAEC - Unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria". Integrative Biology. 4(7):728-733. [doi:10.1039/c2ib00132b]22318347
2012Gómez Restrepo, A. (2012). "Comportamiento en la búsqueda de información: el caso de los estudiantes de postgrado". Revista Interamericana de Bibliotecología. 35(2):133-148.
2012Althabegoiti, M, Lozano Aguirre Beltrán, L, Torres-Tejerizo, G, Ormeño Orrillo, E, Rogel Hernández, M, González Zúñiga, V, Martínez Romero, M. (2012). "Genome sequence of Rhizobium Grahamii CCGE502, a broad-host-range symbiont with low nodulation competitiveness in Phaseolus vulgaris". Journal Of Bacteriology. 194(23):6651-6652. [doi:10.1128/JB.01785-12]23144400
2012Wisniewski-Dye, F, Lozano, L, Acosta-Cruz, E, Borland, S, Drogue, B, Prigent-Combaret, C, Rouy, Z, Barbe, V, Mendoza Herrera, A, Gonzalez, V, Mavingui, P. (2012). "Genome sequence of Azospirillum brasilense CBG497 and comparative analyses of Azospirillum core and accessory genomes provide insight into niche adaptation". Genes. 3(4):576-602. [doi:10.3390/genes3040576]24705077
2012Fernández-Sandoval, M, Huerta-Beristain, G, Trujillo-Martínez, B, Bustos Arcos, V, González Zúñiga, V, Bolivar, F, Gosset, G, Martínez, A. (2012). "Laboratory metabolic evolution improves acetate tolerance and growth on acetate of ethanologenic Escherichia coli under non-aerated conditions in glucose-mineral medium". Applied Microbiology And Biotechnology. 96(5):1291-1300. [doi:10.1007/s00253-012-4177-y]22669633
2012López Guerrero, M, Ormeño Orrillo, E, Centro de Ciencias Genómicas CCG, Mendoza-Vargas, A, Rogel Hernández, M, Ramírez Romero, M, Rosenblueth Laguette, M, Martínez Romero, J, Martínez Romero, M. (2012). "Rhizobial extrachromosomal replicon variability, stability and expression in natural niches". Plasmid. 68(3):149-158. [doi:10.1016/j.plasmid.2012.07.002]22813963
2012Navarro-Noya, Y, Hernandez-Mendoza, E, Morales-Jimenez, J, Jan-Roblero, J, Martinez-Romero, E, Hernandez-Rodriguez, C. (2012). "Isolation and characterization of nitrogen fixing heterotrophic bacteria from the rhizosphere of pioneer plants growing on mine tailings". APPLIED SOIL ECOLOGY. 62():52-60. [doi:10.1016/j.apsoil.2012.07.011]
2012Servín Garcidueñas, L, Rogel Hernández, M, Ormeño Orrillo, E, Delgado-Salinas, A, Martínez Romero, J, Sánchez, F, Martínez Romero, M. (2012). "Genome Sequence of Rhizobium sp. Strain CCGE510, a Symbiont Isolated from Nodules of the Endangered Wild Bean Phaseolus Albescens". Journal Of Bacteriology. 194(22):6310-6311. [doi:10.1128/JB.01536-12]23105056
2012Zamorano Sánchez, D, Reyes-González, A, Gómez Hernández, N, Rivera, P, Georgellis, D, Girard Cuesy, M. (2012). "FxkR Provides the Missing Link in the fixL-fixK Signal Transduction Cascade in Rhizobium etli CFN42". Molecular Plant-Microbe Interactions. 25(11):1506-1517. [doi:10.1094/MPMI-05-12-0136-R]22809273
2012Rosenblueth Laguette, M, Sayavedra Camacho, L, Sámano Sánchez, H, Roth Schulze, A, Martínez Romero, M. (2012). "Evolutionary relationships of flavobacterial and enterobacterial endosymbionts with their scale insect hosts (Hemiptera: Coccoidea)". Journal Of Evolutionary Biology. 25(11):2357-2368. [doi:10.1111/j.1420-9101.2012.02611.x]22994649
2012Lopez-Ortiz, C, Ferrera-Cerrato, R, Alarcon, A, Jose Almaraz, J, Martinez-Romero, E, Remedios Mendoza-Lopez, M. (2012). "ESTABLISHMENT AND PHYSIOLOGICAL RESPONSES OF THE SYMBIOSIS BETWEEN Rhizobium tropici AND Leucaena leucocephala UNDER CONTAMINATED SYSTEMS WITH NAPHTALENE AND PHENANTHRENE". REVISTA INTERNACIONAL DE CONTAMINACION AMBIENTAL. 28(4):333-342.
2012Bonilla-Rosso, G, Eguiarte, L, Romero Camarena, D, Travisano, M, Souza, V. (2012). "Understanding microbial community diversity metrics derived from metagenomes: Performance evaluation using simulated data sets". Fems Microbiology Ecology. 82(1):37-49. [doi:10.1111/j.1574-6941.2012.01405.x]22554028
2012Marin-Cevada, V, Muñoz-Rojas, J, Caballero-Mellado, J, Mascarua-Esparza, M, Castañeda-Lucio, M, Carreno-López, R, Estrada-de los Santos, P, Fuentes-Ramírez, L. (2012). "Antagonistic interactions among bacteria inhabiting pineapple". APPLIED SOIL ECOLOGY. 61(SI):230-235. [doi:10.1016/j.apsoil.2011.11.014]
2012Vences Guzmán, M, Geiger, O, Sohlenkamp, C. (2012). "Ornithine lipids and their structural modifications: From A to E and beyond". Fems Microbiology Letters. 335(1):1-10. [doi:10.1111/j.1574-6968.2012.02623.x]22724388
2012Tejerizo, G, Lozano, L, Gonzalez, V, Bustos, P, Romero, D, Brom, S. (2012). "Draft genome sequence of the bean-nodulating Sinorhizobium fredii strain GR64". Journal Of Bacteriology. 194(24):6978-6978. [doi:10.1128/JB.01882-12]23209231
2012Resendis Antonio, O, Hernández Ortiz, M, Pérez-Tejada Domínguez, Y, Encarnación Guevara, S. (2012). "Functional Modules, Structural Topology, and Optimal Activity in Metabolic Networks". Plos Computational Biology. 8(10):1002720-. [doi:10.1371/journal.pcbi.1002720]23071431
2012Ormeño Orrillo, E, Rogel Hernández, M, Chueire, L, Tiedje, J, Martínez Romero, M, Hungria, M. (2012). "Genome sequences of Burkholderia sp. strains CCGE1002 and H160,isolated from legume nodules in Mexico and Brazil". Journal Of Bacteriology. 194(24):6927-6927. [doi:10.1128/JB.01756-12]23209196
2012García-García, J, Olin-Sandoval, V, Saavedra, E, Girard Cuesy, M, Hernández Delgado, G, Moreno-Sánchez, R. (2012). "Sulfate uptake in photosynthetic Euglena Gracilis. Mechanisms of regulation and contribution to cysteine homeostasis". Biochimica Et Biophysica Acta-General Subjects. 1820(10):1567-1575. [doi:10.1016/j.bbagen.2012.05.002]22609877
2012Estivill, G, Betti, M, Guardado, P, Maestre, A, Arellano, J, Hernandez, G, Márquez, A, Galván, F. (2012). "Functional analysis of site-directed mutants from the active site of higher plant glutamine synthetase". FEBS JOURNAL. 279(1, SI):458-458.
2012Talbi, C, Sánchez, C, Hidalgo-García, A, González, E, Arrese-Igor, C, Girard Cuesy, M, Bedmar, E, Delgado, M. (2012). "Enhanced expression of Rhizobium etli cbb(3) oxidase improves drought tolerance of common bean symbiotic nitrogen fixation". Journal Of Experimental Botany. 63(14):5035-5043. [doi:10.1093/jxb/ers101]22511804
2012Juárez-Verdayes, M, González-Uribe, P, Peralta Díaz, H, Rodríguez-Martínez, S, Jan-Roblero, J, Escamilla-Hernández, R, Cancino-Díaz, M, Cancino-Díaz, J. (2012). "Detection of hssS, hssR, hrtA, and hrtB genes and their expression by hemin in Staphylococcus epidermidis". Canadian Journal Of Microbiology. 58(9):1063-1072. [doi:10.1139/W2012-086]22906238
2012López Guerrero, M, Ormeño Orrillo, E, Velázquez, E, Rogel Hernández, M, Centro de Ciencias Genómicas CCG, González Zúñiga, V, Martínez Romero, J, Martínez Romero, M. (2012). "Rhizobium etli taxonomy revised with novel genomic data and analyses". Systematic And Applied Microbiology. 35(6):353-358. [doi:10.1016/j.syapm.2012.06.009]22858268
2012de la Rosa, J, Ureostegui, P, Martínez, J, Martínez, C, Zuniga, V, Millan, J. (2012). "Babesia bigemina: Initial gene identification by Expressed Sequence Tags (EST) analysis of the intraerythrocytic stage". REVISTA MEXICANA DE CIENCIAS PECUARIAS. 3(1):61-87.
2012López López, A, Rogel Hernández, M, Barois, I, Ceballos, A, Martínez Romero, J, Ormeño Orrillo, E, Martínez Romero, M. (2012). "Rhizobium Grahamii sp. nov., from nodules of Dalea Leporina, Leucaena leucocephala and Clitoria Ternatea, and Rhizobium Mesoamericanum sp. nov., from nodules of Phaseolus vulgaris, siratro, cowpea and Mimosa pudica". International Journal Of Systematic And Evolutionary Microbiology. 62(9):2264-2271. [doi:10.1099/ijs.0.033555-0]22081714
2012Calvillo, G, Romero, D. (2012). "The dominance assignment problem". DISCRETE OPTIM. 9(3):149-158. [doi:10.1016/j.disopt.2012.06.001]
2012Navarro-Cruz, G, Arellano-Garcia, J, Perea-Arango, I, Álvarez-Berber, L, Marquina-Bahena, S, Castillo-España, P. (2012). "Micropropagation and identification of O-palmitoyl-3-O-beta-D-glucoside of beta-sitosterol in the medicinal species Lopezia racemosa". Planta Medica. 78(11):1290-1290.
2012Thomas-Chollier, M, Darbo, E, Herrmann, C, Defrance, M, Thieffry, D, van Helden, J. (2012). "A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs". Nature protocols. 7(8):1551-1568. [doi:10.1038/nprot.2012.088]22836136
2012Perry, G, Xue, Y, Smith, R, Meyer, W, Caliskan, M, Yáñez Cuna, J, Lee, A, Gutiérrez Arcelus, M, Ober, C, Hollox, E, Tyler-Smith, C, Lee, C. (2012). "Evolutionary genetics of the human Rh blood group system". Human Genetics. 131(7):1205-1216. [doi:10.1007/s00439-012-1147-5]22367406
2012Fischer, D, Pfitzner, B, Schmid, M, Simoes-Araújo, J, Reis, V, Pereira, W, Ormeno-Orrillo, E, Hofmann, A, Schloter, M, Martinez-Romero, E, Baldani, J, Hartmann, A. (2012). "Molecular characterisation of the diazotrophic bacterial community in uninoculated and inoculated field-grown sugarcane (Saccharum sp.)". PLANT AND SOIL. 356(1-2):83-99. [doi:10.1007/s11104-011-0812-0]
2012Manoj-Kumar, A, Reddy, K, Manjulatha, M, Blanco, L. (2012). "Polysaccharide-free nucleic acids and proteins of Abelmoschus esculentus for versatile molecular studies". MOLECULAR BIOLOGY. 46(4):535-541. [doi:10.1134/S0026893312030065]23113348
2012Estrada De Los Santos, P, Martínez Aguilar, L, López Lara, I, Caballero Mellado, J. (2012). "Cupriavidus Alkaliphilus sp. nov., a new species associated with agricultural plants that grow in alkaline soils". Systematic And Applied Microbiology. 35(5):310-314. [doi:10.1016/j.syapm.2012.05.005]22738764
2012Garza-Ramos, U, Barrios, H, Hernández-Vargas, M, Rojas-Moreno, T, Reyna-Flores, F, Tinoco, P, Othon, V, Poirel, L, Nordmann, P, Cattoir, V, Ruíz-Palacios, G, Fernandez Vázquez, J, Santamaria Gutiérrez, R, Bustos Arcos, V, Castro, N, Silva-Sánchez, J. (2012). "Transfer of quinolone resistance gene qnrA1 to Escherichia coli through a 50 kb conjugative plasmid resulting from the splitting of a 300 kb plasmid". Journal Of Antimicrobial Chemotherapy. 67(7):1627-1634. [doi:10.1093/jac/dks123]22514263
2012Chino-Flores, C, Dantan-González, E, Vázquez-Ramos, A, Tinoco-Valencia, R, Díaz Mendez, R, Sánchez-Salinas, E, Castrejón-Godinez, M, Ramos-Quintana, F, Ortíz-Hernandez, M. (2012). "Isolation of the opdE gene that encodes for a new hydrolase of Enterobacter sp capable of degrading organophosphorus pesticides". BIODEGRADATION. 23(3):387-397. [doi:10.1007/s10532-011-9517-6]22065283
2012Castillo-Rodal, A, Mazari-Hiriart, M, Lloret-Sánchez, L, Sachman Ruiz, B, Vinuesa Fleischmann, P, López-Vidal, Y. (2012). "Potentially pathogenic nontuberculous mycobacteria found in aquatic systems. Analysis from a reclaimed water and water distribution system in Mexico City". European Journal Of Clinical Microbiology and Infectious Diseases. 31(5):683-694. [doi:10.1007/s10096-011-1359-y]21805195
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2006Batista, C, D'Suze, G, Gomez-Lagunas, F, Zamudio, F, Encamacion, S, Sevcik, C, Possani, L. (2006). "Proteomic analysis of Tityus discrepans scorpion venom and amino acid sequence of novel toxins". Proteomics. 6(12):3718-3727. [doi:10.1002/pmic.200500525]16705749
2006Perin, L, Martinez-Aguilar, L, Castro-Gonzalez, R, Estrada-de Los Santos, P, Cabellos-Avelar, T, Guedes, H, Reis, V, Caballero-Mellado, J. (2006). "Diazotrophic Burkholderia species associated with field-grown maize and sugarcane". Applied And Environmental Microbiology. 72(5):3103-3110. [doi:10.1128/AEM.72.5.3103-3110.2006]16672447
2006Huerta Moreno, A, Collado Vides, P, Francino, M. (2006). "Positional conservation of clusters of overlapping promoter-like sequences in enterobacterial genomes". MOLECULAR BIOLOGY AND EVOLUTION. 23(5):997-1010. [doi:10.1093/molbev/msk004]16547149
2006Caballero-Mellado, J, Tenorio Salgado, S, Onofre Lemus, J, Castro González, R, Estrada De Los Santos, P, Paredes Valdez, G, Peña-Cabriales, J, Díaz-Méndez, R, Martínez-Aguilar, L. (2006). "Mechanisms involved in the promotion of plant growth expressed by new species of nitrogen-fixer Burkholderia". Revista Latinoamericana De Microbiologia. 48(2):155-156.
2006Marin-Cevada, V, Vargas, V, Juarez, M, Lopez, V, Zagada, G, Hernandez, S, Cruz, A, Caballero-Mellado, J, Lopez-Reyes, L, Jimenez-Salgado, T, Carcano-Montiel, M, Fuentes-Ramirez, L. (2006). "Presence of Pantoea Citrea, causal agent of pink disease, in pineapple fields in Mexico". PLANT PATHOLOGY. 55(2):294-294. [doi:10.1111/j.1365-3059.2005.01331.x]
2006González Zúñiga, V, Santamaría, R, Bustos, P, Acosta, J, Fernández, J, Hernández-González, I, Lozano, L, Castillo, S, Dávila, G. (2006). "Genomic diversity of Rhizobium etli: The Complete Genome and its -intraspecific-variation". Revista Latinoamericana De Microbiologia. 48(2):132-134.
2006Caballero Mellado, J. (2006). "Agriculture microbiology and microbe interaction with plants". Revista Latinoamericana De Microbiologia. 48(2):154-155. 17578087
2006Huerta-Nuñez, L, Martínez, J, Alcocer, R, Ramsey, J, Martinez-Romero, E. (2006). "Diversity of endosymbiotic bacteria of insects belonging to the triatominae". Revista Latinoamericana De Microbiologia. 48(2):212-215.
2006Velasco-Garcia, R, Villalobos, M, Ramirez-Romero, M, Mujica-Jimenez, C, Iturriaga, G, Munoz-Clares, R. (2006). "Betaine aldehyde dehydrogenase from pseudomonas Aeruginosa: cloning, over-expression in Escherichia coli, and regulation by choline and salt". Archives Of Microbiology. 185(1):14-22. [doi:10.1007/s00203-005-0054-8]16315011
2006Salgado Osorio, H, Gama Castro, M, Peralta Gil, M, Díaz Peredo, E, Sánchez Solano, E, Santos Zavaleta, A, Martínez Flores, I, Jiménez Jacinto, V, Bonavides Martínez, C, Segura Salazar, J, Martínez Antonio, A, Collado Vides, P. (2006). "RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions.". Nucleic Acids Research. 34(Database issue):394-397. [doi:10.1093/nar/gkj156]16381895
2006Rogel Hernández, M, Torres, C, Lloret y Sánchez, L, Rosenblueth Laguette, M, Hernández-Lucas, I, Martínez Aguilar, L, Martínez Salazar, J, Martínez Romero, M. (2006). "Lateral transfer of Rhizobium symbiotic plasmids leading to genomic innovation". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5():310-318.
2006Martínez Romero, M. (2006). "Detective de bacterias". Descubrimientos y Aportaciones Científicas y Humanísticas Mexicanas en el Siglo XX. (0):-.
2006Lara Flores, M, Blanco López, M, Silvente Keller, S, Graham, M, Ramírez Romero, M, Reddy, P, Hernández Delgado, G, Vance, C. (2006). "Genomic approaches for analysis of legume-Rhizobium symbiotic interactions and nodule metabolism in bean (Phaseolus vulgaris)". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5(0):138-143.
2006Geiger, O, Sohlenkamp, C, López Lara, I. (2006). "Function of rhizobial membrane lipids for the symbiosis with legumes". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5():132-137.
2006Sánchez, F, Quinto, C, López Lara, I, Geiger, O. (2006). "Biology of Plant-Microbe Interactions". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5():1-717.
2006Silva Romero, C, Vinuesa Fleischmann, P, Martínez Romero, M. (2006). "Species delineation and biogeography of Rhizobia: Two case studies". Proceedings of the 12th International Congress on Molecular Plant-Microbe Interactions. 5():319-324.
2006Encarnación Guevara, S, Salazar Bustamante, E, Martínez Batallar, Á, Hernández Ortiz, M, Reyes Pérez, A, Contreras Martínez, S, Vargas Lagunas, M, Domínguez Vidaña, R, Gonzaga Jáuregui, C, Pérez-Tejada Domínguez, Y, Rivero Zaragoza, M, Mora Celis, J. (2006). "GENÓMICA FUNCIONAL EN RIZOBIACEAS". Revista Latinoamericana de Microbiología. 48(2):135-141.
2006Martínez Antonio, A, Janga, S, Salgado Osorio, H, Collado Vides, P. (2006). "Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli". TRENDS IN MICROBIOLOGY. 14(1):22-27. [doi:10.1016/j.tim.2005.11.002]16311037
2006Janga, S, Lamboy, W, Huerta, A, Moreno-Hagelsieb, G. (2006). "The distinctive signatures of promoter regions and operon junctions across prokaryotes". Nucleic Acids Research. 34(14):3980-3987. [doi:10.1093/nar/gkl563]16914446
2006Peralta Díaz, H. (2006). "Biofertilizantes. Alternativa sustentable para la agricultura en méxico". El Abasto. Panorama de la distribución alimenticia en México. ():190-195.
2006López Lara, I, Sohlenkamp, C, Geiger, O. (2006). "The post-genomic era - What comes next?". Revista Latinoamericana De Microbiologia. 48(1):44-45. 17357573
2006Graham, M, Ramirez, M, Valdes-Lopez, O, Lara, M, Tesfaye, M, Vance, C, Hernandez, G. (2006). "Identification of candidate phosphorus stress induced genes in Phaseolus vulgaris through clustering analysis across several plant species". FUNCTIONAL PLANT BIOLOGY. 33(8):789-797. [doi:10.1071/FP06101]
2006Encarnación-Guevara S.. (2006). "Genómica y genómica funcional en microbiología". Revista Latinoamericana de Microbiología. 48(2):131-132. 17578085
2005Encarnacion, S, Hernandez, M, Martinez-Batallar, G, Contreras, S, Vargas, M, Mora, J. (2005). "Comparative proteomics using 2-D gel electrophoresis and mass spectrometry as tools to dissect stimulons and regulons in bacteria with sequenced or partially sequenced genomes". BIOLOGICAL PROCEDURES ONLINE. 7():117-135. [doi:10.1251/bpo110]16145578
2005Davila, S, Pinero, D, Bustos, P, Cevallos, M, Davila, G. (2005). "The mitochondrial genome sequence of the scorpion Centruroides limpidus (Karsch 1879) (Chelicerata; Arachnida)". Gene. 360(2):92-102. [doi:10.1016/j.gene.2005.06.008]16183216
2005Janga, S, Collado-Vides, J, Moreno-Hagelsieb, G. (2005). "Nebulon: A system for the inference of functional relationships of gene products from the rearrangement of predicted operons". Nucleic Acids Research. 33(8):2521-2530. [doi:10.1093/nar/gki545]15867197
2005Le Novere, N, Finney, A, Hucka, M, Bhalla, U, Campagne, F, Collado Vides, P, Crampin, E, Halstead, M, Klipp, E, Mendes, P, Nielsen, P, Sauro, H, Shapiro, B, Snoep, J, Spence, H, Wanner, B. (2005). "Minimum information requested in the annotation of biochemical models (MIRIAM)". Nature Biotechnology. 23(12):1509-1515. [doi:10.1038/nbt1156]16333295
2005Perez-Mendoza, D, Sepulveda, E, Pando, V, Munoz, S, Nogales, J, Olivares, J, Soto, M, Herrera-Cervera, J, Romero, D, Brom, S, Sanjuan, J. (2005). "Identification of the rctA gene, which is required for repression of conjugative transfer of rhizobial symbiotic megaplasmids". Journal Of Bacteriology. 187(21):7341-7350. [doi:10.1128/JB.187.21.7341-7350.2005]16237017
2005Izquierdo, J, Venkova-Canova, T, Ramirez-Romero, M, Tellez-Sosa, J, Hernandez-Lucas, I, Sanjuan, J, Cevallos, M. (2005). "An antisense RNA plays a central role in the replication control of a repC plasmid". Plasmid. 54(3):259-277. [doi:10.1016/j.plasmid.2005.05.003]16005966
2005Silva Romero, C, Vinuesa Fleischmann, P, Eguiarte, L, Souza, V, Martínez Romero, M. (2005). "Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes". MOLECULAR ECOLOGY. 14(13):4033-4050. [doi:10.1111/j.1365-294X.2005.02721.x]16262857
2005Flores López, M, Morales Reyes, L, Ávila Casanueva, A, González Zúñiga, V, Bustos Arcos, V, García Alonso, D, Pérez-Tejada Domínguez, Y, Guo, X, Collado Vides, P, Pinero, D, Dávila Ramos, J, Mora Celis, J, Palacios de la Lama, R. (2005). "Diversification of DNA sequences in the symbiotic genome of Rhizobium etli". Journal Of Bacteriology. 187(21):7185-7192. [doi:10.1128/JB.187.21.7185-7192.2005]16237002
2005Rojas-Jimenez, K, Sohlenkamp, C, Geiger, O, Martínez Romero, M, Werner, D, Vinuesa Fleischmann, P. (2005). "A CIC chloride channel homolog and ornithine-containing membrane lipids of Rhizobium tropici CIAT899 are involved in symbiotic efficiency and acid tolerance". Molecular Plant-Microbe Interactions. 18(11):1175-1185. [doi:10.1094/MPMI-18-1175]16353552
2005Sreevidya, V, Hernandez-Oane, R, So, R, Sullia, S, Stacey, G, Ladha, J, Reddy, P. (2005). "Expression of the legume symbiotic lectin genes psl and gs52 promotes rhizobial colonization of roots in rice". Plant Science. 169(4):726-736. [doi:10.1016/j.plantsci.2005.05.024]
2005Lopez-Lara, I, Gao, J, Soto, M, Solares-Perez, A, Weissenmayer, B, Sohlenkamp, C, Verroios, G, Thomas-Oates, J, Geiger, O. (2005). "Phosphorus-free membrane lipids of Sinorhizobium meliloti are not required for the symbiosis with alfalfa but contribute to increased cell yields under phosphorus-limiting conditions of growth". Molecular Plant-Microbe Interactions. 18(9):973-982. [doi:10.1094/MPMI-18-0973]16167767
2005Munoz-Rojas, J, Fuentes-Ramirez, L, Caballero-Mellado, J. (2005). "Antagonism among Gluconacetobacter diazotrophicus strains in culture media and in endophytic association". Fems Microbiology Ecology. 54(1):57-66. [doi:10.1016/j.femsec.2005.02.011]16329972
2005Ibarra-Junquera, V, Torres, L, Rosu, H, Arguello, G, Collado-Vides, J. (2005). "Nonlinear software sensor for monitoring genetic regulation processes with noise and modeling errors". PHYSICAL REVIEW E. 72(1):11919-11919. [doi:10.1103/PhysRevE.72.011919]16090013
2005Santoyo, G, Martinez-Salazar, J, Rodriguez, C, Romero, D. (2005). "Gene conversion tracts associated with crossovers in Rhizobium etli". Journal Of Bacteriology. 187(12):4116-4126. [doi:10.1128/JB.187.12.4116-4126.2005]15937174
2005Muthukumarasamy, R, Cleenwerck, I, Revathi, G, Vadivelu, M, Janssens, D, Hoste, B, Gum, K, Park, K, Son, C, Sa, T, Caballero-Mellado, J. (2005). "Natural association of Gluconacetobacter diazotrophicus and Diazotrophic Acetobacter Peroxydans with wetland rice". Systematic And Applied Microbiology. 28(3):277-286. [doi:10.1016/j.syapm.2005.01.006]15900973
2005Santoyo Pizano, G, Romero Camarena, D. (2005). "Gene conversion and concerted evolution in bacterial genomes". Fems Microbiology Reviews. 29(2):169-183. [doi:10.1016/j.femsre.2004.10.004]15808740
2005Ramirez, M, Graham, M, Blanco-Lopez, L, Silvente, S, Medrano-Soto, A, Blair, M, Hernandez, G, Vance, C, Lara Flores, M. (2005). "Sequencing and analysis of common bean ESTs. Building a foundation for functional genomics". Plant Physiology. 137(4):1211-1227. [doi:10.1104/pp.104.054999]15824284
2005Vinuesa Fleischmann, P, Leon-Barrios, M, Silva Romero, C, Willems, A, Jarabo-Lorenzo, A, Perez-Galdona, R, Werner, D, Martínez Romero, M. (2005). "Bradyrhizobium canariense sp. nov., an acid-tolerant endosymbiont that nodulates endemic genistoid legumes (Papilionoideae: Genisteae) from the Canary Islands, along with Bradyrhizobium japonicum bv. genistearum, Bradyrhizobium genospecies alpha and Bradyrhizobium genospecies beta". International Journal Of Systematic And Evolutionary Microbiology. 55(2):569-575. [doi:10.1099/ijs.0.63292-0]15774626
2005Medrano-Soto, A, Christen, J, Collado-Vides, J. (2005). "BClass: A Bayesian approach based on mixture models for clustering and classification of heterogeneous biological data". JOURNAL OF STATISTICAL SOFTWARE. 13(2):1-18.
2005Bueno, E, Gomez-Hernandez, N, Girard, L, Bedmar, E, Delgado, M. (2005). "Function of the Rhizobium etli CFN42 nirK gene in nitrite metabolism". BIOCHEMICAL SOCIETY TRANSACTIONS. 33(1):162-163. [doi:10.1042/BST0330162]15667294
2005Palacios de la Lama, R. (2005). "Diseño genómico natural en bacterias". Descubrimientos y Aportaciones Científicas y Humanísticas Mexicanas en el Siglo XX. (0):-.
2005Gonzalez, A, Espinosa, V, Vasconcelos, A, Perez-Rueda, E, Collado Vides, P. (2005). "TRACTOR_DB: A database of regulatory networks in gamma-proteobacterial genomes". Nucleic Acids Research. 33(DATABASE ISS.):98-102. [doi:10.1093/nar/gki054]15608293
2005Keseler, I, Collado Vides, P, Gama Castro, M, Ingraham, J, Paley, S, Paulsen, I, Peralta Gil, M, Karp, P. (2005). "EcoCyc: A comprehensive database resource for Escherichia coli". Nucleic Acids Research. 33(DATABASE ISS.):334-337. [doi:10.1093/nar/gki108]15608210
2005Encarnación Guevara, S, Salazar Bustamante, E, Hernández Ortiz, M, Martínez Batallar, Á, García, J, Flores, H, Reyes Pérez, A, Vargas Lagunas, M, Contreras Martínez, S, Pérez-Tejada Domínguez, Y, Mora Celis, J. (2005). "Proteomic and transcriptomic approaches to study global genome expression in free-living and symbiotically-associated Rhizobium etli and Sinorhizobium meliloti". Current Plant Science and Biotechnology. Agriculture Biological Nitrogen Fixation, Sustainable Agriculture and the Environment. 41():142-.
2005Lloret y Sánchez, L, Martínez Romero, M. (2005). "Evolution and phylogeny of Rhizobium". Revista Latinoamericana De Microbiologia. 47(1-2):43-60. 17061545
2005Resendis Antonio, O, Freyre González, J, Menchaca Mendez, R, Gutiérrez Ríos, R, Martínez Antonio, A, Ávila Sánchez, C, Collado Vides, P. (2005). "Modular analysis of the transcriptional regulatory network of E. coli". TRENDS IN GENETICS. 21(1):16-20. [doi:10.1016/j.tig.2004.11.010]15680508
2005Vinuesa Fleischmann, P, Silva Romero, C, Werner, D, Martínez Romero, M. (2005). "Population genetics and phylogenetic inference in bacterial molecular systematics: The roles of migration and recombination in Bradyrhizobium species cohesion and delineation". Molecular Phylogenetics And Evolution. 34(1):29-54. [doi:10.1016/j.ympev.2004.08.020]15579380
2005Valdes, M, Perez, N, Estrada de los Santos, P, Caballero-Mellado, J, Pena-Cabriales, J, Normand, P, Hirsch, A. (2005). "Non-Frankia actinomycetes isolated from surface-sterilized roots of casuarina equisetifolia fix nitrogen". Applied And Environmental Microbiology. 71(1):460-466. [doi:10.1128/AEM.71.1.460-466.2005]15640222
2005Encarnación Guevara, S. (2005). "The dawn of functional genomics in nitrogen fixation Research". Genomes and Genomics of Nitrogen Fixing Organisms. ():143-163.
2005Kuykendall, L, Young, J, Martínez Romero, M, Kerr, A, Sawada, H. (2005). "Rhizobium". Bergeys Manual of Systematic Bacteriology. 2():325-340.
2005Chavéz-Zamora, J, Salazar Bustamante, E, Encarnación Guevara, S. (2005). "Global analisis of the genome expresion in Sinorhizobium meliloti strain 1021, using microarray". Current Plant Science and Biotechnology. Agriculture Biological Nitrogen Fixation, Sustainable Agriculture and the Environment. 41():331-.
2005Fuentes-Ramírez, L, Caballero Mellado, J. (2005). "Bacterial biofertilizers". PGPR: Biocontrol and Biofertilization. ():143-172.
2005Vargas Lagunas, M, Encarnación Guevara, S, Girard Cuesy, M, Reyes Pérez, A, Pérez-Tejada Domínguez, Y, Mora Celis, J. (2005). "Characterization of the alternative protection programs against oxidative-stress in free life and simbiosis from Rhizobium etli". Current Plant Science and Biotechnology. Agriculture Biological Nitrogen Fixation, Sustainable Agriculture and the Environment. 41():331-.
2005Dávila Ramos, J, González Zúñiga, V, Ramírez Romero, M, Rodríguez Sánchez, O. (2005). "Rhizobium etli genome biology". Nitrogen Fixation: Origins, Applications and Research Progress. 3():133-142.
2005Dávila Ramos, J, Palacios de la Lama, R. (2005). "Origins of genomics in nitrogen fixation research". Nitrogen Fixation: Origins, Applications and Research Progress. 3():1-6.
2005Palacios de la Lama, R, W.E. Newton. (2005). "Nitrogen fixation: origins, applications and research progress". Genomes and Genomics of Nitrogen Fixing Organisms. 3(0):-.
2005Collado Vides, P. (2005). "De cuantas historias se hace nuestro cuerpo". Libro de Lecturas para Secundaria. ():-.
2005Collado Vides, P. (2005). "De que Tamaño es Nuestro Cuerpo". Libro de Lecturas para Secundaria. ():-.
2005Romero, D. (2005). "Revista Latinoamericana de Microbiologia: Message from the Editor in chief". Revista Latinoamericana De Microbiologia. 47(1-2):5-5.
2004Lamboy, W, Moreno-Hagelsieb, G. (2004). "A new method of solution for the occupancy problem and its application to operon size prediction". JOURNAL OF THEORETICAL BIOLOGY. 227(3):315-322. [doi:10.1016/j.jtbi.2003.11.009]15019498
2004Zuniga-Castillo, J, Romero, D, Martinez-Salazar, J. (2004). "The recombination genes addAB are not restricted to gram-positive bacteria: Genetic analysis of the recombination initiation enzymes recF and addAB in Rhizobium etli". Journal Of Bacteriology. 186(23):7905-7913. [doi:10.1128/JB.186.23.7905-7913.2004]15547262
2004Venkova-Canova, T, Soberon, N, Ramirez-Romero, M, Cevallos, M. (2004). "Two discrete elements are required for the replication of a repABC plasmid: an antisense RNA and a stem-loop structure". Molecular Microbiology. 54(5):1431-1444. [doi:10.1111/j.1365-2958.2004.04366.x]15554980
2004Martinez, J, Martinez, L, Rosenblueth, M, Silva, J, Martinez-Romero, E. (2004). "How are gene sequence analyses modifying bacterial taxonomy? The case of Klebsiella". INTERNATIONAL MICROBIOLOGY. 7(4):261-268. 15666246
2004Perez-Rueda, E, Collado Vides, P, Segovia, L. (2004). "Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea". COMPUTATIONAL BIOLOGY AND CHEMISTRY. 28(5-6):341-350. [doi:10.1016/j.compbiolchem.2004.09.004]15556475
2004Pérez, J, Pazos, R, Frausto, J, Rodríguez, G, Romero, D, Cruz, L. (2004). "A statistical approach for algorithm selection". LECT NOTES COMPUT SC. 3059():417-431.
2004Brom Klanner, S, Girard Cuesy, M, Tun Garrido, C, García de los Santos, A, Bustos Arcos, V, González Zúñiga, V, Romero Camarena, D. (2004). "Transfer of the symbiotic plasmid of Rhizobium etli CFN42 requires cointegration with p42a, which may be mediated by site-specific recombination". Journal Of Bacteriology. 186(22):7538-7548. [doi:10.1128/JB.186.22.7538-7548.2004]15516565
2004Hernández Lucas, I, Rogel Hernández, M, Segovia, L, Rojas-Jimenez, K, Martínez Romero, M. (2004). "Phylogenetic relationships of Rhizobia based on citrate synthase gene sequences". Systematic And Applied Microbiology. 27(6):703-706. [doi:10.1078/0723202042369893]15612628
2004Geiger, O, Martínez Morales, F, Sohlenkamp, C, López Lara, I. (2004). "ROLE OF BACTERIAL PHOSPHATIDYLCHOLINE IN SYMBIOTIC AND PATHOGENIC INTERACTIONS". Biology of Molecular Plant-Microbe Interactions. ():423-426.
2004Reis, V, Estrada-de los Santos, P, Tenorio-Salgado, S, Vogel, J, Stoffels, M, Guyon, S, Mavingui, P, Baldani, V, Schmid, M, Baldani, J, Balandreau, J, Hartmann, A, Caballero-Mellado, J. (2004). "Burkholderia tropica sp nov., a novel nitrogen-fixing, plant-associated bacterium". International Journal Of Systematic And Evolutionary Microbiology. 54(6):2155-2162. [doi:10.1099/ijs.0.02879-0]15545451
2004Resendis-Antonio, O, Collado-Vides, J. (2004). "The growth of random networks as a diffusion process". PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS. 342(3-4):551-560. [doi:10.1016/j.physa.2004.05.037]
2004Encarnacion, S, Garcia, J, Hernandez, M, Vargas, M, Contreras, S, Mora, J. (2004). "Protein expression during biofilm formation in Rhizobium etli and Sinorhizobium meliloti". MOLECULAR & CELLULAR PROTEOMICS. 3(10, S):150-150.
2004Medrano Soto, L, Moreno Hagelsieb, G, Vinuesa Fleischmann, P, Christen, J, Collado Vides, P. (2004). "Successful lateral transfer requires codon usage compatibility between foreign genes and recipient genomes". MOLECULAR BIOLOGY AND EVOLUTION. 21(10):1884-1894. [doi:10.1093/molbev/msh202]15240837
2004Vargas, M, Encarnacin, S, Girard, M, Reyes, A, Mora, Y, Mora, J. (2004). "Physiological and proteome characterizations of oxidative-stress response in Rhizobium etli during free life and symbiosis with Phaseolus vulgaris.". MOLECULAR & CELLULAR PROTEOMICS. 3(10, S):160-160.
2004Costa, J, Martínez Romero, M, Lindblad, P. (2004). "Sequence based data supports a single Nostoc strain in individual coralloid roots of cycads". Fems Microbiology Ecology. 49(3):481-487. [doi:10.1016/j.femsec.2004.05.001]19712296
2004Sepulveda, E, Perez-Mendoza, D, Munoz, S, Ramirez-Romero, M, Soto, M, Cervantes, L, Herrera-Cervera, J, Lopez-Lara, I, Geiger, O, Sanuan, J, Brom, S, Romero, D. (2004). "Identification of functional mob regions in Rhizobium etli: Evidence for self-transmissibility of the symbiotic plasmid pRetCFN42d". Journal Of Bacteriology. 186(17):5753-5761. [doi:10.1128/JB.186.17.5753-5761.2004]15317780
2004Gao, J, Weissenmayer, B, Taylor, A, Thomas-Oates, J, Lopez-Lara, I, Geiger, O. (2004). "Identification of a gene required for the formation of lyso-ornithine lipid, an intermediate in the biosynthesis of ornithine-containing lipids". Molecular Microbiology. 53(6):1757-1770. [doi:10.1111/j.1365-2958.2004.04240.x]15341653
2004Goris, J, De Vos, P, Caballero-Mellado, J, Park, J, Falsen, E, Quensen, J, Tiedje, J, Vandamme, P. (2004). "Classification of the biphenyl- and polychlorinated biphenyl-degrading strain LB400(T) and relatives as Burkholderia xenovorans sp nov.". International Journal Of Systematic And Evolutionary Microbiology. 54(5):1677-1681. [doi:10.1099/ijs.0.63101-0]15388727
2004Caballero-Mellado, J, Martinez-Aguilar, L, Paredes-Valdez, G, Estrada-de los Santos, P. (2004). "Burkholderia unamae sp nov., an N-2-fixing rhizospheric and endophytic species". International Journal Of Systematic And Evolutionary Microbiology. 54(4):1165-1172. [doi:10.1099/ijs.0.02951-0]15280286
2004Peralta, H, Mora, Y, Salazar, E, Encarnacion, S, Palacios, R, Mora, J. (2004). "Engineering the nifH promoter region and abolishing poly-ß -hydroxybutyrate accumulation in Rhizobium etli enhance nitrogen fixation in symbiosis with Phaseolus vulgaris". Applied And Environmental Microbiology. 70(6):3272-3281. [doi:10.1128/AEM.70.6.3272-3281.2004]15184121
2004Soberon, N, Venkova-Canova, T, Ramirez-Romero, M, Tellez-Sosa, J, Cevallos, M. (2004). "Incompatibility and the partitioning site of the repABC basic replicon of the symbiotic plasmid from Rhizobium etli". Plasmid. 51(3):203-216. [doi:10.1016/j.plasmid.2004.01.005]15109827
2004Rosenblueth Laguette, M, Martínez Romero, M. (2004). "Rhizobium etli maize populations and their competitivenes for roof colonization". Archives Of Microbiology. 181(5):337-344. [doi:10.1007/s00203-004-0661-9]15024554
2004Sohlenkamp, C, de Rudder, K, Geiger, O. (2004). "Phosphatidylethanolamine Is Not Essential for Growth of Sinorhizobium meliloti on Complex Culture Media". Journal Of Bacteriology. 186(6):1667-1677. [doi:10.1128/JB.186.6.1667-1677.2004]14996797
2004Dunn, M, Araiza, G, Mora, J. (2004). "Biochemical characterization of a Rhizobium etli monovalent cation-stimulated acyl-coenzyme A carboxylase with a high substrate specificity constant for propionyl-coenzyme A". MICROBIOLOGY-SGM. 150(2):399-406. [doi:10.1099/mic.0.26779-0]14766918
2004Rosenblueth Laguette, M, Martínez Martínez, L, Silva, J, Martínez Romero, M. (2004). "Klebsiella variicola, A Novel Species with Clinical and Plant-Associated Isolates". Systematic And Applied Microbiology. 27(1):27-35. [doi:10.1078/0723-2020-00261]15053318
2004Karp, P, Arnaud, M, Collado-Vides, J, Ingraham, J, Paulsen, I, Saier, M. (2004). "The E. coli EcoCyc database: No longer just a metabolic pathway database". Asm News. 70(1):25-30.
2004Salgado Osorio, H, Gama Castro, M, Martínez Antonio, A, Díaz Peredo, E, Sánchez Solano, E, Peralta Gil, M, García Alonso, D, Jiménez Jacinto, V, Santos Zavaleta, A, Bonavides Martínez, C, Collado Vides, P. (2004). "RegulonDB (version 4.0): Transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12". Nucleic Acids Research. 32(DATABASE ISS.):303-306. [doi:10.1093/nar/gkh140]14681419
2004Janga, S, Moreno-Hagelsieb, G. (2004). "Conservation of adjacency as evidence of paralogous operons". Nucleic Acids Research. 32(18):5392-5397. [doi:10.1093/nar/gkh882]15477389
2003Collado Vides, P, Medrano Soto, L, Tusié-Luna, M. (2003). "With the finished human genome in hand, what next?". Genome Biology. 4(7):328-328. [doi:10.1186/gb-2003-4-7-328]12844356
2003Romero, D, Zertuche, F. (2003). "The asymptotic number of attractors in the random map model". J PHYS A-MATH GEN. 36(13):3691-3700. [doi:10.1088/0305-4470/36/13/304]
2003González Zúñiga, V, Bustos Arcos, V, Ramírez Romero, M, Medrano Soto, L, Salgado Osorio, H, Hernández González, I, Hernández Celis, J, Quintero Hernández, V, Moreno Hagelsieb, G, Girard Cuesy, M, Rodríguez Sánchez, O, Flores López, M, Cevallos Gaos, M, Collado Vides, P, Romero Camarena, D, Dávila Ramos, J. (2003). "The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments.". Genome Biology. 4(6):R36-. [doi:10.1186/gb-2003-4-6-r36]12801410
2003Martinez-Morales, F, Schobert, M, Lopez-Lara, I, Geiger, O. (2003). "Pathways for phosphatidylcholine biosynthesis in bacteria". MICROBIOLOGY-SGM. 149(12):3461-3471. [doi:10.1099/mic.0.26522-0]14663079
2003Wang, E, Kan, F, Tan, Z, Toledo García, I, Chen, W, Martínez Romero, M. (2003). "Diverse Mesorhizobium plurifarium populations native to Mexican soils". Archives Of Microbiology. 180(6):444-454. [doi:10.1007/s00203-003-0610-z]14576977
2003Pérez O., J, Pazos R., R, Romero, D, Santaolaya S., R, Rodriguez O., G, Sosa S., V. (2003). "Adaptive and scalable allocation of data-objects in the web". LECT NOTES COMPUT SC. 2667():134-143.
2003Jauregui, R, Abreu-Goodger, C, Moreno-Hagelsieb, G, Collado-Vides, J, Merino, E. (2003). "Conservation of DNA curvature signals in regulatory regions of prokaryotic genes". Nucleic Acids Research. 31(23):6770-6777. [doi:10.1093/nar/gkg882]14627810
2003Munoz-Rojas, J, Caballero-Mellado, J. (2003). "Population dynamics of Gluconacetobacter diazotrophicus in sugarcane cultivars and its effect on plant growth". Microbial Ecology. 46(4):454-464. [doi:10.1007/s00248-003-0110-3]14722690
2003Martinez, L, Caballero-Mellaod, J, Orozco, J, Martinez-Romero, E. (2003). "Diazotrophic bacteria associated with banana (Musa spp.)". PLANT AND SOIL. 257(1):35-47. [doi:10.1023/A:1026283311770]
2003Gutiérrez Ríos, R, Rosenblueth, D, Loza, J, Huerta Moreno, A, Glasner, J, Blattner, F, Collado Vides, P. (2003). "Regulatory network of Escherichia coli: Consistency between literature knowledge and microarray profiles". GENOME RESEARCH. 13(11):2435-2443. [doi:10.1101/gr.1387003]14597655
2003Medina, G, Juarez, K, Diaz, R, Soberon-Chavez, G. (2003). "Transcriptional regulation of pseudomonas Aeruginosa rhlR, encoding a quorum-sensing regulatory protein". MICROBIOLOGY-SGM. 149(11):3073-3081. [doi:10.1099/mic.0.26282-0]14600219
2003Martinez-Antonio, A, Collado-Vides, J. (2003). "Identifying global regulators in transcriptional regulatory networks in bacteria". Current Opinion In Microbiology. 6(5):482-489. [doi:10.1016/j.mib.2003.09.002]14572541
2003Perret, X, Kobayashi, H, Collado Vides, P. (2003). "Regulation of expression of symbiotic genes in Rhizobium sp. NGR234". INDIAN JOURNAL OF EXPERIMENTAL BIOLOGY. 41(10):1101-1113. 15242276
2003Young, J, Kuykendall, L, Martínez Romero, M, Kerr, A, Sawada, H. (2003). "Classification and nomenclature of Agrobacterium and Rhizobium - A reply to Farrand et al. (2003)". International Journal Of Systematic And Evolutionary Microbiology. 53(5):1689-1695. [doi:10.1099/ijs.0.02762-0]13130069
2003Desnoues, N, Lin, M, Guo, X, Ma, L, Carreno-Lopez, R, Elmerich, C. (2003). "Nitrogen fixation genetics and regulation in a pseudomonas Stutzeri strain associated with rice". MICROBIOLOGY-SGM. 149(8):2251-2262. [doi:10.1099/mic.0.26270-0]12904565
2003Guo, X, Flores, M, Mavingui, P, Fuentes, S, Hernandez, G, Davila, G, Palacios, R. (2003). "Natural genomic design in Sinorhizobium meliloti novel genomic architectures". GENOME RESEARCH. 13(8):1810-1817. [doi:10.1101/gr.1260903]12902376
2003Willems, A, Fernandez-Lopez, M, Munoz-Adelantado, E, Goris, J, De Vos, P, Martínez Romero, M, Toro, N, Gillis, M. (2003). "Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion". International Journal Of Systematic And Evolutionary Microbiology. 53(4):1207-1217. [doi:10.1099/ijs.0.02264-0]12892151
2003Lopez-Lara, I, Sohlenkamp, C, Geiger, O. (2003). "Membrane lipids in plant-associated bacteria: Their biosyntheses and possible functions". Molecular Plant-Microbe Interactions. 16(7):567-579. [doi:10.1094/MPMI.2003.16.7.567]12848422
2003Encarnacion, S, Guzman, Y, Dunn, M, Hernandez, M, Vargas, M, Mora, J. (2003). "Proteome analysis of aerobic and fermentative metabolism in Rhizobium etli CE3". Proteomics. 3(6):1077-1085. [doi:10.1002/pmic.200300427]12833533
2003Djordjevic, M, Chen, H, Natera, S, Van Noorden, G, Menzel, C, Taylor, S, Renard, C, Geiger, O, Weiller, G. (2003). "A global analysis of protein expression profiles in Sinorhizobium meliloti: Discovery of new genes for nodule occupancy and stress adaptation". Molecular Plant-Microbe Interactions. 16(6):508-524. [doi:10.1094/MPMI.2003.16.6.508]12795377
2003Silvente, S, Camas, A, Lara Flores, M. (2003). "Molecular cloning of the cDNA encoding aspartate aminotransferase from bean root nodules and determination of its role in nodule nitrogen metabolism". Journal Of Experimental Botany. 54(387):1545-1551. [doi:10.1093/jxb/erg161]12730270
2003Vargas, M, Encarnacion, S, Davalos, A, Reyes-Perez, A, Mora, Y, Garcia-de los Santos, A, Brom, S, Moral, J. (2003). "Only one catalase, katG, is detectable in Rhizobium etli, and is encoded along with the regulator OxyR on a plasmid replicon". MICROBIOLOGY-SGM. 149(5):1165-1176. [doi:10.1099/mic.0.25909-0]12724378
2003Broughton, W, Hernandez, G, Blair, M, Beebe, S, Gepts, P, Vanderleyden, J. (2003). "Beans (Phaseolus spp.) - model food legumes". PLANT AND SOIL. 252(1):55-128. [doi:10.1023/A:1024146710611]
2003Martinez-Romero, E. (2003). "Diversity of Rhizobium-Phaseolus vulgaris symbiosis: Overview and perspectives". PLANT AND SOIL. 252(1):11-23. [doi:10.1023/A:1024199013926]
2003Snoeck, C, Verreth, C, Hernández Lucas, I, Martínez Romero, M, Vanderleyden, J. (2003). "Identification of a third sulfate activation system in Sinorhizobium sp. strain BR816: The CysDN sulfate activation complex". Applied And Environmental Microbiology. 69(4):2006-2014. [doi:10.1128/AEM.69.4.2006-2014.2003]12676676
2003Tun-Garrido, C, Bustos, P, Gonzalez, V, Brom, S. (2003). "Conjugative transfer of p42a from Rhizobium etli CFN42, which is required for mobilization of the symbiotic plasmid, is regulated by quorum sensing". Journal Of Bacteriology. 185(5):1681-1692. [doi:10.1128/JB.185.5.1681-1692.2003]12591886
2003Cordoba, E, Shishkova, S, Vance, C, Hernandez, G. (2003). "Antisense inhibition of NADH glutamate synthase impairs carbon/nitrogen assimilation in nodules of alfalfa (Medicago sativa L.)". PLANT JOURNAL. 33(6):1037-1049. [doi:10.1046/j.1365-313X.2003.01686.x]12631328
2003Toledo García, I, Lloret y Sánchez, L, Martínez Romero, M. (2003). "Sinorhizobium americanus sp. nov., a New Sinorhizobium species nodulating native Acacia spp. in Mexico". Systematic And Applied Microbiology. 26(1):54-64. [doi:10.1078/072320203322337317]12747410
2003Uhde-Stone, C, Zinn, K, Ramirez-Yanez, M, Li, A, Vance, C, Allan, D. (2003). "Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency". Plant Physiology. 131(3):1064-1079. [doi:10.1104/pp.102.016881]12644659
2003Sohlenkamp, C, Lopez-Lara, I, Geiger, O. (2003). "Biosynthesis of phosphatidylcholine in bacteria". Progress In Lipid Research. 42(2):115-162. [doi:10.1016/S0163-7827(02)00050-4]12547654
2003Valencia-Cantero, E, Pena-Cabriales, J, Martinez-Romero, E. (2003). "The corrosion effects of sulfate- and ferric-reducing bacterial consortia on steel". GEOMICROBIOLOGY JOURNAL. 20(2):157-169. [doi:10.1080/01490450390193264]
2003Suarez, R, Marquez, J, Shishkova, S, Hernandez, G. (2003). "Overexpression of alfalfa cytosolic glutamine synthetase in nodules and flowers of transgenic Lotus japonicus plants". Physiologia Plantarum. 117(3):326-336. [doi:10.1034/j.1399-3054.2003.00053.x]12654032
2003Silvente, S, Camas, A, Lara Flores, M. (2003). "Heterogeneity of sucrose synthase genes in bean (Phaseolus vulgaris L.): evidence for a nodule-enhanced sucrose synthase gene". Journal Of Experimental Botany. 54(383):749-755. [doi:10.1097/jxb/erg086]12554718
2003Silva, C, Vinuesa, P, Eguiarte, L, Martinez-Romero, E, Souza, V. (2003). "Rhizobium etli and Rhizobium gallicum nodulate common bean (Phaseolus vulgaris) in a traditionally managed milpa plot in Mexico: Population genetics and biogeographic implications". Applied And Environmental Microbiology. 69(2):884-893. [doi:10.1128/AEM.69.2.884-893.2003]12571008
2003Vinuesa Fleischmann, P, Neumann-Silkow, F, Pacios-Bras, C, Spaink, H, Martínez Romero, M, Werner, D. (2003). "Genetic analysis of a pH-regulated operon from Rhizobium tropici CIAT899 involved in acid tolerance and nodulation competitiveness". Molecular Plant-Microbe Interactions. 16(2):159-168. [doi:10.1094/MPMI.2003.16.2.159]12575750
2003Valderrama, B, Oliver, P, Medrano-Soto, A, Vazquez-Duhalt, R. (2003). "Evolutionary and structural diversity of fungal laccases". Antonie Van Leeuwenhoek International Journal of General and Molecular; Microbiology. 84(4):289-299. [doi:10.1023/A:1026070122451]14574106
2003Jahn, O, Davila, G, Romero, D, Noel, K. (2003). "BacS: An abundant bacteroid protein in Rhizobium etli whose expression ex planta requires nifA". Molecular Plant-Microbe Interactions. 16(1):65-73. [doi:10.1094/MPMI.2003.16.1.65]12580283
2002Ramírez Alfonsín, J, Romero, D. (2002). "Embeddability of the combinohedron". DISCRETE MATH. 254(1-3):473-483. [doi:10.1016/S0012-365X(01)00298-9]
2002Dunn, M, Araiza, G, Encarnacion, S, del Vargas, M, Mora, J. (2002). "Effect of aniA (carbon flux regulator) and phaC (poly-ß-hydroxybutyrate synthase) mutations on pyruvate metabolism in Rhizobium etli". Journal Of Bacteriology. 184(8):2296-2299. [doi:10.1128/JB.184.8.2296-2299.2002]11914362
2002Encarnacion, S, del Vargas, M, Dunn, M, Davalos, A, Mendoza, G, Mora, Y, Mora, J. (2002). "aniA regulates reserve polymer accumulation and global protein expression in Rhizobium etli". Journal Of Bacteriology. 184(8):2287-2295. [doi:10.1128/JB.184.8.2287-2295.2002]11914361
2002Collado-Vides, J, Moreno-Hagelsieb, G, Medrano-Soto, A. (2002). "Microbial computational genomics of gene regulation". PURE AND APPLIED CHEMISTRY. 74(6):899-905.
2002Geiger, O, López Lara, I. (2002). "Rhizobial acyl carrier proteins and their roles in the formation of bacterial cell-surface components that are required for the development of nitrogen-fixing root nodules on legume hosts". Fems Microbiology Letters. 208(2):153-162. [doi:10.1016/S0378-1097(02)00478-0]11959430
2002Collado Vides, P, Moreno Hagelsieb, G, Pérez Rueda, E, Salgado Osorio, H, Huerta Moreno, A, Gutiérrez Ríos, R, Rosenblueth, D, Christen, A, Benítez Bellón, E, Medrano Soto, L, Gama Castro, M, Santos Zavaleta, A, Bonavides Martínez, C, DíPeredo, E, Sánchez Solano, E, Millá, D. (2002). "Genomics of Gene Regulation: The view from Escherichia coli". Gene Regulation and Metabolism, Post-Genomic Computational Approaches. ():103-128.
2002Degrave, W, Vargas, R, Alvarez, F, Collado Vides, P, Nunez, L, Ramirez, J, Grau, O. (2002). "Towards a bioinformatics network for Latin America and the Caribbean (LACBioNet).". Applied Bioinformatics. 1(1):53-56. 15130857
2002Moreno Hagelsieb, G, Collado Vides, P. (2002). "A powerful non-homology method for the prediction of operons in prokaryotes.". Bioinformatics. 18 Suppl 1():329-336. 12169563
2002Sohlenkamp, C, Wood, C, Roeb, G, Udvardi, M. (2002). "Characterization of Arabidopsis AtAMT2, a high-affinity ammonium transporter of the plasma membrane". Plant Physiology. 130(4):1788-1796. [doi:10.1104/pp.008599]12481062
2002Quintero, V, Cevallos, M, Davila, G. (2002). "A site-specific recombinase (RinQ) is required to exert incompatibility towards the symbiotic plasmid of Rhizobium etli". Molecular Microbiology. 46(4):1023-1032. [doi:10.1046/j.1365-2958.2002.03205.x]12421308
2002Garcia-de los Santos, A, Morales, A, Baldoma, L, Clark, S, Brom, S, Yost, C, Hernandez-Lucas, I, Aguilar, J, Hynes, M. (2002). "The glcB locus of Rhizobium leguminosarum VF39 encodes an arabinose-inducible malate synthase". Canadian Journal Of Microbiology. 48(10):922-932. [doi:10.1139/w02-091]12489782
2002Hernandez-Lucas, I, Mavingui, P, Finan, T, Chain, P, Martinez-Romero, E. (2002). "in vivo cloning strategy for Rhizobium plasmids". Biotechniques. 33(4):782-788. [doi:10.2144/02334st01]12398186
2002Wang, E, Tan, Z, Willems, A, Fernandez-Lopez, M, Reinhold-Hurek, B, Martínez Romero, M. (2002). "Sinorhizobium morelense sp. nov., a Leucaena leucocephala-associated bacterium that is highly resistant to multiple antibiotics". International Journal Of Systematic And Evolutionary Microbiology. 52(5):1687-1693. [doi:10.1099/ijs.0.01954-0]12361275
2002Tellez-Sosa, J, Soberon, N, Vega-Segura, A, Torres-Marquez, M, Cevallos, M. (2002). "The Rhizobium etli cyaC product: Characterization of a novel adenylate cyclase class". Journal Of Bacteriology. 184(13):3560-3568. [doi:10.1128/JB.184.13.3560-3568.2002]12057950
2002Silvente Keller, S, Blanco López, M, Camas, A, Ortega, J, Ramírez Yáñez, M, Lara Flores, M. (2002). "Rhizobium etli mutant modulates carbon and nitrogen metabolism in Phaseolus vulgaris nodules". Molecular Plant-Microbe Interactions. 15(7):728-733. [doi:10.1094/MPMI.2002.15.7.728]12118889
2002Collado-Vides, J, Moreno-Hagelsieb, G, Medrano-Soto, A. (2002). "Microbial computational genomics of gene regulation". PURE AND APPLIED CHEMISTRY. 74(6):899-905. [doi:10.1351/pac200274060899]
2002Camas, A, Cardenas, L, Quinto, C, Lara Flores, M. (2002). "Expression of different calmodulin genes in bean (Phaseolus vulgaris L.): Role of nod factor on calmodulin gene regulation". Molecular Plant-Microbe Interactions. 15(5):428-436. [doi:10.1094/MPMI.2002.15.5.428]12036273
2002Huerta, A, Glasner, J, Gutierrez-Rios, R, Blattner, F, Collado-Vides, J. (2002). "GETools: gene expression tool for analysis of transcriptome experiments in E. coli". TRENDS IN GENETICS. 18(4):217-218. [doi:10.1016/S0168-9525(01)02620-8]
2002Estrada, P, Mavingui, P, Cournoyer, B, Fontaine, F, Balandreau, J, Caballero-Mellado, J. (2002). "A N-2-fixing endophytic Burkholderia sp associated with maize plants cultivated in Mexico". Canadian Journal Of Microbiology. 48(4):285-294. [doi:10.1139/w02-023]12030700
2002Castillo, P, Zamilpa, A, Marquez, J, Hernandez, G, Lara Flores, M, Alvarez, L. (2002). "Comparative study of differentiation levels and valepotriate content of in vitro cultures and regenerated and wild plants of Valeriana edulis ssp procera". JOURNAL OF NATURAL PRODUCTS. 65(4):573-575. [doi:10.1021/np0104267]11975504
2002Lira-Ruan, V, Ross, E, Sarath, G, Klucas, R, Arredondo-Peter, R. (2002). "Mapping and analysis of a hemoglobin gene family from Oryza sativa". PLANT PHYSIOLOGY AND BIOCHEMISTRY. 40(3):199-202. [doi:10.1016/S0981-9428(02)01365-7]
2002Sessitsch, A, Howieson, J, Perret, X, Antoun, H, Martinez-Romero, E. (2002). "Advances in Rhizobium research". CRITICAL REVIEWS IN PLANT SCIENCES. 21(4):323-378. [doi:10.1080/0735-260291044278]
2002Falcon, L, Escobar-Briones, E, Romero, D. (2002). "Nitrogen fixation patterns displayed by cyanobacterial consortia in Alchichica crater-lake, Mexico". Hydrobiologia. 467(1-3):71-78. [doi:10.1023/A:1014984629985]
2002Mavingui, P, Flores, M, Guo, X, Davila, G, Perret, X, Broughton, W, Palacios, R. (2002). "Dynamics of genome architecture in Rhizobium sp strain NGR234". Journal Of Bacteriology. 184(1):171-176. [doi:10.1128/JB.184.1.171-176.2002]11741857
2002del Río G., Santamaria Gutiérrez, R, Díaz M.L., Soberón Mainero, X, López-Munguía, A. (2002). "Novel and potential applications of alpha-amylases in the food industry". Engineering and Food for the 21st Century. ():913-925.
2002Karp, P, Riley, M, Saier, M, Paulsen, I, Collado-Vides, J, Paley, S, Pellegrini-Toole, A, Bonavides, C, Gama-Castro, S. (2002). "The EcoCyc database". Nucleic Acids Research. 30(1):56-58. [doi:10.1093/nar/30.1.56]11752253
2002Moreno Hagelsieb, G, Collado Vides, P. (2002). "Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context". In Silico Biology: Journal of Biological Systems Modeling and Multi-Scale Simulation. 2(2):87-95. 12066843
2001Dunn, M, Araiza, G, Finan, T. (2001). "Cloning and characterization of the pyruvate carboxylase from Sinorhizobium meliloti Rm1021". Archives Of Microbiology. 176(5):355-363. [doi:10.1007/s002030100336]11702077
2001Arechaga-Ocampo, E, Saenz-Rivera, J, Sarath, G, Klucas, R, Arredondo-Peter, R. (2001). "Cloning and expression analysis of hemoglobin genes from maize (Zea mays ssp mays) and teosinte (Zea mays ssp parviglumis)". BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION. 1522(1):1-8. [doi:10.1016/S0167-4781(01)00288-3]11718894
2001Lopez-Lara, I, Geiger, O. (2001). "The nodulation protein NodG shows the enzymatic activity of an 3-oxoacyl-acyl carrier protein reductase". Molecular Plant-Microbe Interactions. 14(3):349-357. [doi:10.1094/MPMI.2001.14.3.349]11277432
2001Gutierrez-Zamora, M, Martinez-Romero, E. (2001). "Natural endophytic association between Rhizobium etli and maize (Zea mays L.)". JOURNAL OF BIOTECHNOLOGY. 91(2-3):117-126. [doi:10.1016/S0168-1656(01)00332-7]11566384
2001Gao, J, Terefework, Z, Chen, W, Lindstrom, K. (2001). "Genetic diversity of Rhizobia isolated from Astragalus adsurgens growing in different geographical regions of China". JOURNAL OF BIOTECHNOLOGY. 91(2-3, SI):155-168. [doi:10.1016/S0168-1656(01)00337-6]11566387
2001Lopez-Lara, I, Geiger, O. (2001). "Novel pathway for phosphatidylcholine biosynthesis in bacteria associated with eukaryotes". JOURNAL OF BIOTECHNOLOGY. 91(2-3):211-221. [doi:10.1016/S0168-1656(01)00331-5]11566392
2001Tan, K, Moreno Hagelsieb, G, Collado Vides, P, Stormo, G. (2001). "A comparative genomics approach to prediction of new members of regulons". GENOME RESEARCH. 11(4):566-584. [doi:10.1101/gr.149301]11282972
2001Díaz-Leal, H, Martínez-Bernal, J, Romero, D. (2001). "Dimension of the fixed point set of a nilpotent endomorphism on the flag variety". BOL SOC MAT MEX. 7(1):23-33.
2001Chichkova, S, Arellano, J, Vance, C, Hernandez, G. (2001). "Transgenic tobacco plants that overexpress alfalfa NADH-glutamate synthase have higher carbon and nitrogen content". Journal Of Experimental Botany. 52(364):2079-2087. [doi:10.1093/jexbot/52.364.2079]11604446
2001Ramirez-Romero, M, Tellez-Sosa, J, Barrios, H, Perez-Oseguera, A, Rosas, V, Cevallos, M. (2001). "RepA negatively autoregulates the transcription of the repABC operon of the Rhizobium etli symbiotic plasmid basic replicon". Molecular Microbiology. 42(1):195-204. [doi:10.1046/j.1365-2958.2001.02621.x]11679078
2001Pérez-Rueda, E, Collado-Vides, J. (2001). "Common history at the origin of the position - Function correlation in transcriptional regulators in archaea and bacteria". Journal Of Molecular Evolution. 53(3):172-179. [doi:10.1007/s002390010207]11523004
2001Fuentes-Ramirez, L, Bustillos-Cristales, R, Tapia-Hernandez, A, Jimenez-Salgado, T, Wang, E, Martinez-Romero, E, Caballero-Mellado, J. (2001). "Novel nitrogen-fixing acetic acid bacteria, Gluconacetobacter johannae sp. nov. and Gluconacetobacter azotocaptans sp. nov., associated with coffee plants". International Journal Of Systematic And Evolutionary Microbiology. 51(4):1305-1314. [doi:10.1099/00207713-51-4-1305]11491326
2001Rogel Hernández, M, Hernández Lucas, I, Kuykendall, L, Balkwill, D, Martínez Romero, M. (2001). "Nitrogen-Fixing Nodules with Ensifer adhaerens Harboring Rhizobium tropici Symbiotic Plasmids". Applied And Environmental Microbiology. 67(7):3264-3268. [doi:10.1128/AEM.67.7.3264-3268.2001]11425750
2001Ramírez-Benítez, M, Moreno-Hagelsieb, G, Almagro, J. (2001). "VIR.II: a new interface with the antibody sequences in the Kabat database". Biosystems. 61(2-3):125-131. [doi:10.1016/S0303-2647(01)00166-6]11716972
2001Lira Ruan, V, Sarath, G, Klucas, R, Arredondo Peter, J. (2001). "Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions". Plant Science. 161(2):279-287. [doi:10.1016/S0168-9452(01)00411-3]11448759
2001Estrada-De los Santos, P, Bustillos-Cristales, R, Caballero-Mellado, J. (2001). "Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution". Applied And Environmental Microbiology. 67(6):2790-2798. [doi:10.1128/AEM.67.6.2790-2798.2001]11375196
2001Fuentes, S, Allen, D, Ortiz-Lopez, A, Hernandez, G. (2001). "Over-expression of cytosolic glutamine synthetase increases photosynthesis and growth at low nitrogen concentrations". Journal Of Experimental Botany. 52(358):1071-1081. [doi:10.1093/jexbot/52.358.1071]11432923
2001Moreno-Hagelsieb, G, Trevino, V, Pérez-Rueda, E, Smith, T, Collado-Vides, J. (2001). "Transcription unit conservation in the three domains of life: A perspective from Escherichia coli". TRENDS IN GENETICS. 17(4):175-177. [doi:10.1016/S0168-9525(01)02241-7]11275307
2001Ross, E, Shearman, L, Mathiesen, M, Zhou, Y, Arredondo-Peter, R, Sarath, G, Klucas, R. (2001). "Nonsymbiotic hemoglobins in rice are synthesized during germination and in differentiating cell types". Protoplasma. 218(3-4):125-133. [doi:10.1007/BF01306602]11770429
2001Young, J, Kuykendall, L, Martinez-Romero, E, Kerr, A, Sawada, H. (2001). "A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis". International Journal Of Systematic And Evolutionary Microbiology. 51(1):89-103. [doi:10.1099/00207713-51-1-89]11211278
2001Dobbelaere, S, Croonenborghs, A, Thys, A, Ptacek, D, Vanderleyden, J, Dutto, P, Labandera-Gonzalez, C, Caballero-Mellado, J, Aguirre, J, Kapulnik, Y, Brener, S, Burdman, S, Kadouri, D, Sarig, S, Okon, Y. (2001). "Responses of agronomically important crops to inoculation with Azospirillum". AUSTRALIAN JOURNAL OF PLANT PHYSIOLOGY. 28(9):871-879. [doi:10.1071/PP01074]
2001Wang, E, Martínez Romero, J, López Lara, I. (2001). "Rhizobium y su destacada simbiosis con plantas". Microbios en Línea. ():-.
2001Salgado, H, Santos-Zavaleta, A, Gama-Castro, S, Millen-Zarate, D, Diaz-Peredo, E, Sanchez-Solano, F, Pérez-Rueda, E, Bonavides-Martinez, C, Collado-Vides, J. (2001). "RegulonDB (version 3.2): Transcriptional regulation and operon organization in Escherichia coli K-12". Nucleic Acids Research. 29(1):72-74. [doi:10.1093/nar/29.1.72]11125053
2001Hershberg, R, Bejerano, G, Santos-Zavaleta, A, Margalit, H. (2001). "PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites". Nucleic Acids Research. 29(1):277-277. [doi:10.1093/nar/29.1.277]11125111
2000Sohlenkamp, C, Shelden, M, Howitt, S, Udvardi, M. (2000). "Characterization of Arabidopsis AtAMT2, a novel ammonium transporter in plants". FEBS LETTERS. 467(2-3):273-278. [doi:10.1016/S0014-5793(00)01153-4]10675553
2000Martinez-Salazar, J, Romero, D. (2000). "Role of the ruvB gene in homologous and homeologous recombination in Rhizobium etli". Gene. 243(1-2):125-131. [doi:10.1016/S0378-1119(99)00548-X]10675620
2000Salgado Osorio, H, Moreno Hagelsieb, G, Smith, T, Collado Vides, P. (2000). "Operons in Escherichia coli: Genomic analyses and predictions". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 97(12):6652-6657. [doi:10.1073/pnas.110147297]10823905
2000Girard Cuesy, M, Brom Klanner, S, Dávalos Rodríguez, A, López, O, Soberón Chávez, M, Romero Camarena, D. (2000). "Differential regulation of fixN-reiterated genes in Rhizobium etli by a novel fixL-fixK cascade". Molecular Plant-Microbe Interactions. 13(12):1283-1292. [doi:10.1094/MPMI.2000.13.12.1283]11106020
2000Jarabo-Lorenzo, A, Velazquez, E, Perez-Galdona, R, Vega-Hernandez, M, Martinez-Molina, E, Mateos, P, Vinuesa, P, Martinez-Romero, E, Leon-Barrios, M. (2000). "Restriction fragment length polymorphism analysis of 16S rDNA and low molecular weight RNA profiling of rhizobial isolates from shrubby legumes endemic to the Canary islands". Systematic And Applied Microbiology. 23(3):418-425. [doi:10.1016/S0723-2020(00)80073-9]11108022
2000Flores, M, Mavingui, P, Perret, X, Broughton, W, Romero, D, Hernandez, G, Davila, G, Palacios, R. (2000). "Prediction, identification, and artificial selection of DNA rearrangements in Rhizobium: Toward a natural genomic design". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 97(16):9138-9143. [doi:10.1073/pnas.97.16.9138]10922070
2000Castillo, A, Taboada, H, Mendoza, A, Valderrama, B, Encarnacion, S, Mora, J. (2000). "Role of GOGAT in carbon and nitrogen partitioning in Rhizobium etli". MICROBIOLOGY-SGM. 146(7):1627-1637. [doi:10.1099/00221287-146-7-1627]10878127
2000Hernández, L, Sotolongo, M, Rosabal, Y, Menéndez, C, Ramírez, R, Caballero Mellado, J, Arrieta, J. (2000). "Structural levansucrase gene (lsdA) constitutes a functional locus conserved in the species Gluconacetobacter diazotrophicus". Archives Of Microbiology. 174(1-2):120-124. [doi:10.1007/s002030000173]10985751
2000Brom, S, Garcia-de los Santos, A, Cervantes, L, Palacios, R, Romero, D. (2000). "In Rhizobium etli symbiotic plasmid transfer, nodulation competitivity and cellular growth require interaction among different replicons". Plasmid. 44(1):34-43. [doi:10.1006/plas.2000.1469]10873525
2000Wang, E, Martinez-Romero, E. (2000). "Sesbania herbacea-Rhizobium huautlense nodulation in flooded soils and comparative characterization of S. herbacea-nodulating Rhizobia in different environments". Microbial Ecology. 40(1):25-32. [doi:10.1007/s002480000010]10977874
2000Ramirez-Romero, M, Soberon, N, Perez-Oseguera, A, Tellez-Sosa, J, Cevallos, M. (2000). "Structural elements required for replication and incompatibility of the Rhizobium etli symbiotic plasmid". Journal Of Bacteriology. 182(11):3117-3124. [doi:10.1128/JB.182.11.3117-3124.2000]10809690
2000Weissenmayer, B, Geiger, O, Benning, C. (2000). "Disruption of a gene essential for sulfoquinovosyldiacylglycerol biosynthesis in Sinorhizobium meliloti has no detectable effect on root nodule symbiosis". Molecular Plant-Microbe Interactions. 13(6):666-672. [doi:10.1094/MPMI.2000.13.6.666]10830266
2000González-Pasayo, R, Martínez Romero, M. (2000). "Multiresistance genes of Rhizobium etli CFN42". Molecular Plant-Microbe Interactions. 13(5):572-577. [doi:10.1094/MPMI.2000.13.5.572]10796024
2000Cruz-Vera, L, TOLEDO, I, Hernández-Sánchez, J, Guarneros, G. (2000). "Molecular basis for the temperature sensitivity of Escherichia coli pth(Ts)". Journal Of Bacteriology. 182(6):1523-1528. [doi:10.1128/JB.182.6.1523-1528.2000]10692356
2000Valencia-Morales, E, Romero, D. (2000). "Recombination enhancement by replication (RER) in Rhizobium etli". Genetics. 154(3):971-983. 10757747
2000Cevallos Gaos, M. (2000). "Armas biológicas". ¿Cómo ves?. 15():10-14.
2000Salgado, H, Santos-Zavaleta, A, Gama-Castro, S, Millan-Zarate, D, Blattner, F, Collado-Vides, J. (2000). "RegulonDB (version 3.0): Transcriptional regulation and operon organization in Escherichia coli K-12". Nucleic Acids Research. 28(1):65-67. [doi:10.1093/nar/28.1.65]10592182
2000Strainic, M, Sullivan, J, Collado-Vides, J, deHaseth, P. (2000). "Promoter interference in a bacteriophage lambda control region: Effects of a range of interpromoter distances". Journal Of Bacteriology. 182(1):216-220. [doi:10.1128/JB.182.1.216-220.2000]10613884
2000López-Lara, I, Geiger, O. (2000). "Expression and purification of four different rhizobial acyl carrier proteins". MICROBIOLOGY-SGM. 146(4):839-849. [doi:10.1099/00221287-146-4-839]10784042
2000Schoenbeck, M, Temple, S, Trepp, G, Blumenthal, J, Samac, D, Gantt, J, Hernandez, G, Vance, C. (2000). "Decreased NADH glutamate synthase activity in nodules and flowers of alfalfa (Medicago sativa L.) transformed with an antisense glutamate synthase transgene". Journal Of Experimental Botany. 51(342):29-39. [doi:10.1093/jexbot/51.342.29]10938793
2000Tapia-Hernandez, A, Bustillos-Cristales, M, Jimenez-Salgado, T, Caballero-Mellado, J, Fuentes-Ramirez, L. (2000). "Natural endophytic occurrence of Acetobacter diazotrophicus in pineapple plants". Microbial Ecology. 39(1):49-55. [doi:10.1007/s002489900190]10790517
2000Diouf, A, de Lajudie, P, Neyra, M, Kersters, K, Gillis, M, Martinez-Romero, E, Gueye, M. (2000). "Polyphasic characterization of Rhizobia that nodulate Phaseolus vulgaris in West Africa (Senegal and Gambia)". International Journal Of Systematic And Evolutionary Microbiology. 50(1):159-170. [doi:10.1099/00207713-50-1-159]10826800
2000Lira-Ruan K., Sarath G., Klucas R.V., Arredondo-Peter R.. (2000). "Characterization of leghemoglobin from a mimosoid legume, Leucaena esculenta, root nodules". Revista Brasileira de Fisiologia Vegetal. 12(1):37-44.
2000Arredondo Peter, J, Ramírez, Y, Sarath, G, Klucas, R. (2000). "SEQUENCE ANALYSIS OF AN ANCIENT HEMOGLOBIN cDNA ISOLATED FROM THE MOSS Physcomitrella patens". Plant Physiology. 122():1457-.
1999de Rudder, K, Sohlenkamp, C, Geiger, O. (1999). "Plant-exuded choline is used for rhizobial membrane lipid biosynthesis by phosphatidylcholine synthase". JOURNAL OF BIOLOGICAL CHEMISTRY. 274(28):20011-20016. [doi:10.1074/jbc.274.28.20011]10391951
1999Caballero-Mellado, J, Martinez-Romero, E. (1999). "Soil fertilization limits the genetic diversity of Rhizobium in bean nodules". Symbiosis. 26(2):111-121.
1999Romero, D, Barrón, C, Gómez, S. (1999). "The optimal geometry of Lennard-Jones clusters: 148-309". COMPUT PHYS COMMUN. 123(1-3):87-96.
1999Romero, D, Martinez-Salazar, J, Ortiz, E, Rodriguez, C, Valencia-Morales, E. (1999). "Repeated sequences in bacterial chromosomes and plasmids: A glimpse from sequenced genomes". Research In Microbiology. 150(9-10):735-743. [doi:10.1016/S0923-2508(99)00119-9]10673011
1999Cevallos Gaos, M. (1999). "La Peste, ayer y hoy". ¿Cómo ves?. 12():22-26.
1999Ramirez, M, Valderrama, B, Arredondo-Peter, R, Soberon, M, Mora, J, Hernandez, G. (1999). "Rhizobium etli genetically engineered for the heterologous expression of Vitreoscilla sp. hemoglobin: Effects on free-living and symbiosis". Molecular Plant-Microbe Interactions. 12(11):1008-1015. [doi:10.1094/MPMI.1999.12.11.1008]
1999Tan, Z, Wang, E, Peng, G, Zhu, M, Martinez-Romero, E, Chen, W. (1999). "Characterization of bacteria isolated from wild legumes in the north- western regions of China". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(4):1457-1469. [doi:10.1099/00207713-49-4-1457]10555327
1999Wang, E, Roel, M, Garcia-de los Santos, A, Martinez-Romero, J, Cevallos, M, Martinez-Romero, E. (1999). "Rhizobium etli bv. mimosae, a novel biovar isolated from Mimosa affinis". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(4):1479-1491. [doi:10.1099/00207713-49-4-1479]10555329
1999Moreno-Hagelsieb, G, Gomez-Puyou, A, Soberon, X. (1999). "Escherichia coli TEM1 beta-lactamase in CTAB reverse micelles: exchange/diffusion-limited catalysis". FEBS LETTERS. 459(1):111-114. [doi:10.1016/S0014-5793(99)01228-4]10508927
1999Laeremans, T, Snoeck, C, Marien, J, Verreth, C, Martínez Romero, M, Prome, J, Vanderleyden, J. (1999). "Phaseolus vulgaris recognizes Azorhizobium caulinodans nod factors with a variety of chemical substituents". Molecular Plant-Microbe Interactions. 12(9):820-824. [doi:10.1094/MPMI.1999.12.9.820]10494633
1999Herrera-Cervera, J, Caballero-Mellado, J, Laguerre, G, Tichy, H, Requena, N, Amarger, N, Martinez-Romero, E, Olivares, J, Sanjuan, J. (1999). "At least five rhizobial species nodulate Phaseolus vulgaris in a Spanish soil". Fems Microbiology Ecology. 30(1):87-97. [doi:10.1016/S0168-6496(99)00044-6]
1999Castillo, M, Flores, M, Mavingui, P, Martinez-Romero, E, Palacios, R, Hernandez, G. (1999). "Increase in alfalfa nodulation, nitrogen fixation, and plant growth by specific DNA amplification in Sinorhizobium meliloti". Applied And Environmental Microbiology. 65(6):2716-2722. 10347066
1999Fuentes-Ramirez, L, Caballero-Mellado, J, Sepulveda, J, Martinez-Romero, E. (1999). "Colonization of sugarcane by Acetobacter diazotrophicus is inhibited by high N-fertilization". Fems Microbiology Ecology. 29(2):117-128. [doi:10.1016/S0168-6496(98)00125-1]
1999Soberon, M, Lopez, O, Morera, C, Girard, M, Tabche, M, Miranda, J. (1999). "Enhanced nitrogen fixation in a Rhizobium etli ntrC mutant that overproduces the Bradyrhizobium japonicum symbiotic terminal oxidase cbb(3)". Applied And Environmental Microbiology. 65(5):2015-2019. 10223993
1999Wang, E, Martinez-Romero, J, Martinez-Romero, E. (1999). "Genetic diversity of Rhizobia from Leucaena leucocephala nodules in Mexican soils". MOLECULAR ECOLOGY. 8(5):711-724. [doi:10.1046/j.1365-294X.1999.00608.x]
1999Thieffry, D, Romero, D. (1999). "The modularity of biological regulatory networks". Biosystems. 50(1):49-59. [doi:10.1016/S0303-2647(98)00087-2]10235650
1999Corvera Poire, A, Prome, D, Prome, J, Martínez Romero, M, Romero Camarena, D. (1999). "The nolL gene from Rhizobium etli determines nodulation efficiency by mediating the acetylation of the fucosyl residue in the nodulation factor". Molecular Plant-Microbe Interactions. 12(3):236-246. [doi:10.1094/MPMI.1999.12.3.236]10065560
1999Brom Klanner, S, Romero Camarena, D. (1999). "Plasmid biology 98: international symposium on plasmid biology". Plasmid. 41(2):141-177. 10087219
1999Wang, E, van Berkum, P, Sui, X, Beyene, D, Chen, W, Martinez-Romero, E. (1999). "Diversity of Rhizobia associated with Amorpha fruticosa isolated from Chinese soils and description of Mesorhizobium amorphae sp. nov.". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 49(1):51-65. [doi:10.1099/00207713-49-1-51]10028247
1999Salgado, H, Santos, A, Garza-Ramos, U, van Helden, J, Diaz, E, Collado-Vides, J. (1999). "RegulonDB (version 2.0): A database on transcriptional regulation in Escherichia coli". Nucleic Acids Research. 27(1):59-60. [doi:10.1093/nar/27.1.59]9847141
1998Thieffry, D, Salgado, H, Huerta, A, Collado-Vides, J. (1998). "Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12". Bioinformatics. 14(5):391-400. [doi:10.1093/bioinformatics/14.5.391]9682052
1998van Helden, J, Andre, B, Collado Vides, P. (1998). "Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies". Journal Of Molecular Biology. 281(5):827-842. [doi:10.1006/jmbi.1998.1947]9719638
1998Martinez-Romero, E, Hernandez-Lucas, I, Pena-Cabriales, J, Castellanos, J. (1998). "Symbiotic performance of some modified Rhizobium etli strains in assays with Phaseolus vulgaris beans that have a high capacity to fix N2". PLANT AND SOIL. 204(1):89-94. [doi:10.1023/A:1004383028331]
1998Arredondo-Peter, R, Hargrove, M, Moran, J, Sarath, G, Klucas, R. (1998). "Plant hemoglobins". Plant Physiology. 118(4):1121-1125. [doi:10.1104/pp.118.4.1121]9847086
1998Sievers, M, Schlegel, H, Caballero-Mellado, J, Dobereiner, J, Ludwig, W. (1998). "Phylogenetic identification of two major nitrogen-fixing bacteria associated with sugarcane". Systematic And Applied Microbiology. 21(4):505-508. [doi:10.1016/S0723-2020(98)80062-3]9924818
1998Ludwig, W, Amann, R, Martinez-Romero, E, Schonhuber, W, Bauer, S, Neef, A, Schleifer, K. (1998). "rRNA based identification and detection systems for Rhizobia and other bacteria". PLANT AND SOIL. 204(1):1-19. [doi:10.1023/A:1004350708767]
1998Laeremans, T, Martinez-Romero, E, Vanderleyden, J. (1998). "Isolation and sequencing of a second Rhizobium tropici CFN299 genetic locus that contains genes homologous to amino acid sulphate activation genes". MITOCHONDRIAL DNA. 9(1):65-70. [doi:10.3109/10425179809050027]9773278
1998Vasquez-Arroyo, J, Sessitsch, A, Martinez, E, Pena-Cabriales, J. (1998). "Nitrogen fixation and nodule occupancy by native strains of Rhizobium on different cultivars of common bean (Phaseolus vulgaris L.)". PLANT AND SOIL. 204(1):147-154. [doi:10.1023/A:1004399531966]
1998Mandon, K, Michel-Reydellet, N, Encarnacion, S, Kaminski, P, Leija, A, Cevallos, M, Elmerich, C, Mora, J. (1998). "Poly-ß-hydroxybutyrate turnover in Azorhizobium caulinodans is required for growth and affects nifA expression". Journal Of Bacteriology. 180(19):5070-5076. 9748438
1998Encarnacion, S, Calderon, J, Gelbard, A, Cooper, A, Mora, J. (1998). "Glutamine biosynthesis and the utilization of succinate and glutamine by Rhizobium etli and Sinorhizobium meliloti". MICROBIOLOGY-SGM. 144(9):2629-2638. [doi:10.1099/00221287-144-9-2629]9782512
1998Perez-Ramirez, N, Rogel, M, Wang, E, Castellanos, J, Martinez-Romero, E. (1998). "Seeds of Phaseolus vulgaris bean carry Rhizobium etli". Fems Microbiology Ecology. 26(4):289-296. [doi:10.1016/S0168-6496(98)00043-9]
1998Hernandez-Sanchez, J, Valadez, J, Herrera, J, Ontiveros, C, Guarneros, G. (1998). "lambda bar minigene-mediated inhibition of protein synthesis involves accumulation of peptidyl-tRNA and starvation for tRNA". EMBO JOURNAL. 17(13):3758-3765. [doi:10.1093/emboj/17.13.3758]9649445
1998Wang, E, van Berkum, P, Beyene, D, Sui, X, Dorado, O, Chen, W, Martinez-Romero, E. (1998). "Rhizobium huautlense sp. nov., a symbiont of Sesbania herbacea that has a close phylogenetic relationship with Rhizobium galegae". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 48(3):687-699. [doi:10.1099/00207713-48-3-687]9734023
1998Mavingui, P, Laeremans, T, Flores, M, Romero, D, Martinez-Romero, E, Palacios, R. (1998). "Genes essential for nod factor production and nodulation are located on a symbiotic amplicon (AMPRtrCFN299pc60) in Rhizobium tropici". Journal Of Bacteriology. 180(11):2866-2874. 9603874
1998Dunn, M. (1998). "Tricarboxylic acid cycle and anaplerotic enzymes in Rhizobia". Fems Microbiology Reviews. 22(2):105-123. [doi:10.1016/S0168-6445(98)00010-2]9729766
1998Rodriguez, C, Romero, D. (1998). "Multiple recombination events maintain sequence identity among members of the nitrogenase multigene family in Rhizobium etli". Genetics. 149(2):785-794. 9611191
1998Collado-Vides, J, Gutierrez-Rios, R, Bel-Enguix, G. (1998). "Networks of transcriptional regulation encoded in a grammatical model". Biosystems. 47(1-2):103-118. [doi:10.1016/S0303-2647(98)00016-1]9715754
1998Thieffry Jacot-Descombes, D, Huerta Moreno, A, Pérez Rueda, E, Collado Vides, P. (1998). "From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli". Bioessays. 20(5):433-440. <a target="_blank" href="http://dx.doi.org/10.1002/(SICI)1521-1878(199805)20:53.0.CO;2-2">[doi:10.1002/(SICI)1521-1878(199805)20:53.0.CO;2-2]9670816
1998Mendoza, A, Valderrama, B, Leija, A, Mora, J. (1998). "nifA-dependent expression of glutamate dehydrogenase in Rhizobium etli modifies nitrogen partitioning during symbiosis". Molecular Plant-Microbe Interactions. 11(2):83-90. [doi:10.1094/MPMI.1998.11.2.83]9450332
1998Olsthoorn, M, López Lara, I, Petersen, B, Bock, K, Haverkamp, J, Spaink, H, Thomas Oates, J. (1998). "Novel branched Nod factor structure results from -(1 3) fucosyl transferase activity: the major lipo-chitin oligosaccharides from Mesorhizobium loti strain NZP2213 bear an -(1 3) fucosyl subtituent on a nonterminal backbone residue". Biochemistry. 37(25):9024-9032.
1998Huerta, A, Salgado, H, Thieffry, D, Collado-Vides, J. (1998). "RegulonDB: A database on transcriptional regulation in Escherichia coli". Nucleic Acids Research. 26(1):55-59. [doi:10.1093/nar/26.1.55]9399800
1997Barrón, C, Gómez, S, Romero, D. (1997). "Lower energy icosahedral atomic clusters with incomplete core". Applied Mathematics Letters. 10(5):25-28. [doi:10.1016/S0893-9659(97)00078-5]
1997Ontiveros, C, Valadez, J, Hernandez, J, Guarneros, G. (1997). "Inhibition of Escherichia coli protein synthesis by abortive translation of phage lambda minigenes". Journal Of Molecular Biology. 269(2):167-175. [doi:10.1006/jmbi.1997.1017]9191062
1997Blattner, F, Plunkett, G, Bloch, C, Perna, N, Burland, V, Riley, M, ColladoVides, J, Glasner, J, Rode, C, Mayhew, G, Gregor, J, Davis, N, Kirkpatrick, H, Goeden, M, Rose, D, Mau, B, Shao, Y. (1997). "The complete genome sequence of Escherichia coli K-12". Science. 277(5331):1453-1462. [doi:10.1126/science.277.5331.1453]9278503
1997Laeremans, T, Coolsaet, N, Verreth, C, Snoeck, C, Hellings, N, Vanderleyden, J, Martinez-Romero, E. (1997). "Functional redundancy of genes for sulphate activation enzymes in Rhizobium sp. BR816". MICROBIOLOGY-SGM. 143(12):3933-3942. [doi:10.1099/00221287-143-12-3933]9421916
1997Romero Camarena, D, Palacios de la Lama, R. (1997). "Gene amplification and genomic plasticity in prokaryotes". Annual Review of Genetics. 31():91-111. [doi:10.1146/annurev.genet.31.1.91]9442891
1997MirandaRios, J, Morera, C, Taboada, H, Davalos, A, Encarnacion, S, Mora, J, Soberon, M. (1997). "Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb(3), in Rhizobium etli". Journal Of Bacteriology. 179(22):6887-6893. [doi:10.1128/jb.179.22.6887-6893.1997]9371431
1997Barrera, L, Trujillo, M, Goodfellow, M, Garcia, F, HernandezLucas, I, Davila, G, vanBerkum, P, MartinezRomero, E. (1997). "Biodiversity of bradyrhizobia nodulating Lupinus spp.". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 47(4):1086-1091. [doi:10.1099/00207713-47-4-1086]9336911
1997Hernandez, J, Ontiveros, C, Valadez, J, Buckingham, R, Guarneros, G. (1997). "Regulation of protein synthesis by minigene expression". Biochimie. 79(8):527-531. [doi:10.1016/S0300-9084(97)82746-0]9451455
1997Jiménez-Salgado, T, FuentesRamirez, L, Tapia-Hernández, A, Mascarua-Esparza, M, Martinez-Romero, E, CaballeroMellado, J. (1997). "Coffea arabica L., a new host plant for Acetobacter diazotrophicus, and isolation of other nitrogen-fixing acetobacteria". Applied And Environmental Microbiology. 63(9):3676-3683. 9293018
1997GarciadelosSantos, A, Brom, S. (1997). "Characterization of two plasmid-borne lps beta loci of Rhizobium etli required for lipopolysaccharide synthesis and for optimal interaction with plants". Molecular Plant-Microbe Interactions. 10(7):891-902. [doi:10.1094/MPMI.1997.10.7.891]9304861
1997RamirezRomero, M, Bustos, P, Girard, L, Rodriguez, O, Cevallos, M, Davila, G. (1997). "Sequence, localization and characteristics of the replicator region of the symbiotic plasmid of Rhizobium etli". MICROBIOLOGY-SGM. 143(8):2825-2831. [doi:10.1099/00221287-143-8-2825]9274036
1997Tan, Z, Xu, X, Wang, E, Gag, J, MartinezRomero, E, Chen, W. (1997). "Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related Rhizobia". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 47(3):874-879. [doi:10.1099/00207713-47-3-874]9226921
1997Chichkova, S, Arellano, J, Svoboda, S, Hernandez, G. (1997). "Ectopic overexpression of NADH-glutamate synthase in transgenic tobacco modifies plant response to excess of ammonium.". Plant Physiology. 114(3, S):911-911.
1997Mavingui Malonda, A, Flores López, M, Romero Camarena, D, Martínez Romero, M, Palacios de la Lama, R. (1997). "Generation of Rhizobium Strains with Improved Symbiotic Properties by Random Dna Amplification (RDA)". Nature Biotechnology. 15(6):564-569. [doi:10.1038/nbt0697-564]9181580
1997Calderón, J, Olvera, L, Martinez, L, Davila, G. (1997). "A Neurospora crassa mutant altered in the regulation of L-amino acid oxidase". MICROBIOLOGY-SGM. 143(6):1969-1974. [doi:10.1099/00221287-143-6-1969]9202472
1997AguilarGaytan, R, Cerbon, M, Cevallos, M, Lizano, M, Huberman, A. (1997). "Sequence of a cDNA encoding the molt-inhibiting hormone from the Mexican crayfish Procambarus bouvieri (Crustacea, Decapoda)". ASIA-PACIFIC JOURNAL OF MOLECULAR BIOLOGY AND BIOTECHNOLOGY. 5(1):51-55.
1997Spaink, H, Bakkers, J, Bladergroen, M, Bloemberg, G, Dandal, I, Díaz, C, Blok Tip, L, Gisel, A, Harteveld, M, López Lara, I, Kafetzopoulos, D, Kamst, E, Kijne, J, Meijer, D, Lugtenberg, B, Ovtsyna, A, Potrykus, I, Quaedvlieg, N, Quinto, C, Ritsema, T, Sautter, C, Schlaman, H, Thomas Oates, J, van Boom, J, van der Drift, K, van der Marel, G, van Leeuwen, S, Veldhuis, A, Wijfjes, A. (1997). "The molecular basis of host specificity of Rhizobia". Biology of plant-microbe interactions: Proceedings of the 8th. International Symposium on Molecular Plant-Microbr Interactions, Knoxville, Tennessee, july 14-19, 1996. 1():299-306.
1997Thieffry, D. (1997). "Contributions of the ''Rouge-Cloitre group'' to the notion of ''messenger RNA''". HISTORY AND PHILOSOPHY OF THE LIFE SCIENCES. 19(1):89-111. 9284644
1997Thieffry Jacot-Descombes, D, Rosenblueth, D, Huerta Moreno, A, Salgado Osorio, H, Collado Vides, P. (1997). "Definite-clause grammars for the analysis of CIS-regulatory regions in E. coli.". Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. ():441-452. 9390313
1997Collado-Vides, J, Huerta, A, Klose, K. (1997). "Three models of gene regulation in E. coli". LECT NOTES COMPUT SC. 1278():72-78.
1997Romero, D, Sánchez-Flores, A. (1997). "Omnipotence in stretchable two-dimensional scaling". MATH SOC SCI. 33(1):1-21. [doi:10.1016/S0165-4896(96)00817-7]
1996Pérez Oseguera, M, GUERECA, L. (1996). "Acceptor Reactions of Levansucrase from Bacillus circulans. Enzyme Eng. XIII Annals. New York Academy of Science.". Acceptor Reactions of Levansucrase from Bacillus circulans. Vol 799():743-746.
1996ColladoVides, J. (1996). "Towards a unified grammatical model of s70 and s54 bacterial promoters". Biochimie. 78(5):351-363. [doi:10.1016/0300-9084(96)84767-5]8905154
1996Rosenblueth, D, Thieffry, D, Huerta, A, Salgado, H, ColladoVides, J. (1996). "Syntactic recognition of regulatory regions in Escherichia coli". COMPUTER APPLICATIONS IN THE BIOSCIENCES. 12(5):415-422. 8996790
1996Dunn, M, Encarnacion, S, Araiza, G, Vargas, M, Davalos, A, Peralta, H, Mora, Y, Mora, J. (1996). "Pyruvate carboxylase from Rhizobium etli: Mutant characterization, nucleotide sequence, and physiological role". Journal Of Bacteriology. 178(20):5960-5970. [doi:10.1128/jb.178.20.5960-5970.1996]8830693
1996Girard, L, Valderrama, B, Palacios, R, Romero, D, Davila, G. (1996). "Transcriptional activity of the symbiotic plasmid of Rhizobium etli is affected by different environmental conditions". MICROBIOLOGY-SGM. 142(10):2847-2856. [doi:10.1099/13500872-142-10-2847]
1996Laeremans, T, Caluwaerts, I, Verreth, C, Rogel Hernández, M, Vanderleyden, J, Martínez Romero, M. (1996). "Isolation and characterization of the Rhizobium tropici nod factor sulfation genes". Molecular Plant-Microbe Interactions. 9(6):492-500. [doi:10.1094/MPMI-9-0492]8755625
1996Thomas-Oates, J, van den Berg, J, Bloemberg, G, van der Drift, K, Geiger, O, López Lara, I, Rademaker, G, Spaink, H. (1996). "Structural determination and biosynthetic studies of the rhizobial Nod metabolites: the lipo-chitin oligosaccharides". Mass spectrometry in the Biological Sciences. ():385-401. [doi:10.1007/978-1-4612-0229-5]
1996Valderrama, B, Davalos, A, Girard, L, Morett, E, Mora, J. (1996). "Regulatory proteins and CIS-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes". Journal Of Bacteriology. 178(11):3119-3126. [doi:10.1128/jb.178.11.3119-3126.1996]8655489
1996Taboada, H, Encarnacion, S, Vargas, M, Mora, Y, MartinezRomero, E, Mora, J. (1996). "Glutamine synthetase II constitutes a novel taxonomic marker in Rhizobium etli and other Rhizobium species". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 46(2):485-491. [doi:10.1099/00207713-46-2-485]
1996Hofestadt, R, Mavrovouniotis, M, Collado Vides, P, Loffler, M. (1996). "Modeling and simulation of metabolic pathways, gene regulation and cell differentiation. International Conference and Research Center for Computer Science, Schloss Dagstuhl, Saarland, Germany, 22-27 October, 1995". Bioessays. 18(4):333-335. [doi:10.1002/bies.950180412]8967902
1996Cevallos, M, Encarnacion, S, Leija, A, Mora, Y, Mora, J. (1996). "Genetic and physiological characterization of a Rhizobium etli mutant strain unable to synthesize poly-ß-hydroxybutyrate". Journal Of Bacteriology. 178(6):1646-1654. [doi:10.1128/jb.178.6.1646-1654.1996]8626293
1996Arellano, J, Vazquez, F, Villegas, T, Hernandez, G. (1996). "Establishment of transformed root cultures of Perezia cuernavacana producing the sesquiterpene quinone perezone". PLANT CELL REPORTS. 15(7):455-458. 24178452
1996Santos, A, Brom, S, Romero, D. (1996). "Rhizobium plasmids in bacteria-legume interactions". World Journal Of Microbiology & Biotechnology. 12(2):119-125. [doi:10.1007/BF00364676]24415159
1996Thieffry, D, Burian, R. (1996). "Jean Brachet's alternative scheme for protein synthesis". TRENDS IN BIOCHEMICAL SCIENCES. 21(3):114-117. [doi:10.1016/S0968-0004(96)10015-3]8882586
1996Thieffry, D. (1996). "Escherichia coli as a model system with which to study cell differentiation". HISTORY AND PHILOSOPHY OF THE LIFE SCIENCES. 18(2):163-193. 9122371
1996Martinez-Romero, E, Caballero-Mellado, J. (1996). "Rhizobium phylogenies and bacterial genetic diversity". CRITICAL REVIEWS IN PLANT SCIENCES. 15(2):113-140. [doi:10.1080/07352689609701938]
1996Barrón, C, Gómez, S, Romero, D. (1996). "Archimedean polyhedron structure yields a lower energy atomic cluster". Applied Mathematics Letters. 9(5):75-78. [doi:10.1016/0893-9659(96)00076-6]
1996Romero, D, Martinez, L, Fionova, L. (1996). "Computer simulation of grain boundary spatial distribution in a three-dimensional polycrystal with cubic structure". Acta Mater. 44(1):391-402. [doi:10.1016/1359-6454(95)00142-X]
1996MartinezRomero, E, CaballeroMellado, J. (1996). "Rhizobium phylogenies and bacterial genetic diversity". CRITICAL REVIEWS IN PLANT SCIENCES. 15(2):113-140. [doi:10.1080/713608131]
1996Folch Mallol, J, Marroqui, S, Sousa, C, Manyani, H, López Lara, I, van der Drift, K, Haverkamp, J, Quinto, C, Gil Serrano, A, Thomas Oates, J, Spaink, H, Megías, M. (1996). "Characterization of Rhizobium tropici CIAT899 nodulation factors: the role of nodH and nodPQ in their sulphation". Molecular Plant-Microbe Interactions. 9(3):151-163.
1995HERNANDEZLUCAS, I, PARDO, M, SEGOVIA, L, MIRANDA, J, MARTINEZROMERO, E. (1995). "Rhizobium tropici chromosomal citrate synthase gene". Applied And Environmental Microbiology. 61(11):3992-3997. 8526514
1995Cárdenas, L, Domínguez, J, Quinto, C, López-Lara, I, Lugtenberg, B, Spaink, H, Rademaker, G, Haverkamp, J, Thomas-Oates, J. (1995). "Isolation, chemical structures and biological activity of the lipo-chitin oligosaccharide nodulation signals from Rhizobium etli". PLANT MOLECULAR BIOLOGY. 29(3):453-464. [doi:10.1007/BF00020977]8534845
1995López-Lara, I, van Der Drift, K, van Brussel, A, Haverkamp, J, Lugtenberg, B, Thomas-Oates, J, Spaink, H. (1995). "Induction of nodule primordia on Phaseolus and Acacia by lipo-chitin oligosaccharide nodulation signals from broad-host-range Rhizobium strain GRH2". PLANT MOLECULAR BIOLOGY. 29(3):465-477. [doi:10.1007/BF00020978]8534846
1995CABALLEROMELLADO, J, FUENTESRAMIREZ, L, REIS, V, MARTINEZROMERO, E. (1995). "GENETIC-STRUCTURE OF Acetobacter-diazotrophicus POPULATIONS AND IDENTIFICATION OF A NEW GENETICALLY DISTANT GROUP". Applied And Environmental Microbiology. 61(8):3008-3013. 16535102
1995HERNANDEZ, G, RAMIREZ, M, SUAREZ, R, FUENTES, S. (1995). "ROOT EXUDED nod-GENE INDUCING SIGNALS LIMIT THE NODULATION CAPACITY OF DIFFERENT ALFALFA VARIETIES WITH Rhizobium-meliloti". PLANT CELL REPORTS. 14(10):626-629. [doi:10.1007/BF00232726]24194309
1995Mendoza Herrera, A, Leija Salas, A, Martínez Romero, M, Hernández Delgado, G, Mora Celis, J. (1995). "The enhancement of ammonium assimilation in Rhizobium etli prevents nodulation of Phaseolus vulgaris". Molecular Plant-Microbe Interactions. 8(4):584-592. [doi:10.1094/MPMI-8-0584]8589413
1995HERNANDEZLUCAS, I, SEGOVIA, L, MARTINEZROMERO, E, PUEPPKE, S. (1995). "Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L.". Applied And Environmental Microbiology. 61(7):2775-2779. 7618891
1995LOHRKE, S, ORF, J, MARTINEZROMERO, E, SADOWSKY, M. (1995). "HOST-CONTROLLED RESTRICTION OF NODULATION BY Bradyrhizobium-japonicum STRAINS IN SEROGROUP-110". Applied And Environmental Microbiology. 61(6):2378-2383. 16535054
1995Toledo García, I, Rangel, P, Hansberg, W. (1995). "Redox imbalance at the start of each morphogenetic step of Neurospora crassa conidiation". ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. 319(2):519-524. [doi:10.1006/abbi.1995.1326]7786037
1995ENCARNACION, S, DUNN, M, WILLMS, K, MORA, J. (1995). "Fermentative and aerobic metabolism in Rhizobium etli". Journal Of Bacteriology. 177(11):3058-3066. [doi:10.1128/jb.177.11.3058-3066.1995]7768801
1995GENIAUX, E, FLORES, M, PALACIOS, R, MARTINEZ, E. (1995). "Presence of megaplasmids in Rhizobium tropici and further evidence of differences between the two R. tropici subtypes". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 45(2):392-394. [doi:10.1099/00207713-45-2-392]
1995BARRIOS, H, Fischer, H, Hennecke, H, MORETT, E. (1995). "OVERLAPPING PROMOTERS FOR 2 DIFFERENT RNA-POLYMERASE HOLOENZYMES CONTROL Bradyrhizobium-japonicum nifA EXPRESSION". Journal Of Bacteriology. 177(7):1760-1765. [doi:10.1128/jb.177.7.1760-1765.1995]7896698
1995DURAN, S, CALDERON, J. (1995). "ROLE OF THE GLUTAMINE TRANSAMINASE-OMEGA-AMIDASE PATHWAY AND GLUTAMINASE IN GLUTAMINE DEGRADATION IN Rhizobium-ETLI". MICROBIOLOGY-SGM. 141(3):589-595. [doi:10.1099/13500872-141-3-589]
1995López Lara, I, Orgambide, O, Dazzo, F, Olivares, J, Toro, N. (1995). "Surface polysaccharide mutants of Rhizobium sp. (Acacia) strain GRH2: Major requirement of lipopolysaccharide for successful invasion of Acacia nodules and host range determination". MICROBIOLOGY-SGM. 141(3):573-581. [doi:10.1099/13500872-141-3-573]7711895
1995ROMERO, D, MARTINEZSALAZAR, J, GIRARD, L, BROM, S, DAVILA, G, PALACIOS, R, FLORES, M, RODRIGUEZ, C. (1995). "Discrete amplifiable regions (amplicons) in the symbiotic plasmid of Rhizobium etli CFN42". Journal Of Bacteriology. 177(4):973-980. [doi:10.1128/jb.177.4.973-980.1995]7860608
1995López Lara, I, van den Berg, J, Thomas-Oates, J, Glushka, J, Lugtenberg, B, Spaink, H. (1995). "Structural identification of the iipo-chitin oligosaccharide nodulation signals of Rhizobium loti". Molecular Microbiology. 15(4):627-638. [doi:10.1111/j.1365-2958.1995.tb02372.x]7783635
1995Peralta Díaz, H, CALDERON JIMENEZ, J, DU PONT, G, DURAN, S, HUERTA SAQUERO, A. (1995). "El metabolismo de nitrógeno y carbono en Rhizobium en vida libre y en simbiosis con leguminosas.". Biotecnologia Aplicada. 3(5):208-223.
1994Garduño- Juárez, R, Romero, D. (1994). "Heuristic methods in conformational space search of peptides". THEOCHEM-J MOL STRUC. 308(C):115-123. [doi:10.1016/0166-1280(94)80097-9]
1994TOLEDO, I, AGUIRRE, J, HANSBERG, W. (1994). "Enzyme inactivation related to a hyperoxidant state during conidiation of Neurospora crassa". MICROBIOLOGY-SGM. 140(9):2391-2397. [doi:10.1099/13500872-140-9-2391]7952190
1994ROMANOV, V, HERNANDEZLUCAS, I, MARTINEZROMERO, E. (1994). "CARBON METABOLISM ENZYMES OF Rhizobium-tropici CULTURES AND BACTEROIDS". Applied And Environmental Microbiology. 60(7):2339-2342. 16349319
1994CABALLEROMELLADO, J, MARTINEZROMERO, E. (1994). "LIMITED GENETIC DIVERSITY IN THE ENDOPHYTIC SUGARCANE BACTERIUM Acetobacter-diazotrophicus". Applied And Environmental Microbiology. 60(5):1532-1537. 16349254
1994MARTINEZROMERO, E. (1994). "Recent developments in Rhizobium taxonomy". PLANT AND SOIL. 161(1):11-20. [doi:10.1007/BF02183081]
1994ROMANOV, V, MARTINEZROMERO, E. (1994). "Sucrose transport and hydrolysis in Rhizobium tropici". PLANT AND SOIL. 161(1):91-96. [doi:10.1007/BF02183088]
1994GRAHAM, P, DRAEGER, K, FERREY, M, CONROY, M, HAMMER, B, MARTINEZ, E, AARONS, S, QUINTO, C. (1994). "Acid pH tolerance in strains of Rhizobium and Bradyrhizobium, and initial studies on the basis for acid tolerance of Rhizobium trpici UMR1899". Canadian Journal Of Microbiology. 40(3):198-207. [doi:10.1139/m94-033]
1994Soto, M, Zorzano, A, Garcia-Rodriguez, F, Mercado-Blanco, J, Lopez-Lara, I, Olivares, J, Toro, N. (1994). "Identification of a novel Rhizobium meliloti nodulation efficiency nfe gene homolog of Agrobacterium ornithine cyclodeaminase". Molecular Plant-Microbe Interactions. 7(6):703-707. [doi:10.1094/MPMI-7-0703]7873778
1994PARDO, M, LAGUNEZ, J, MIRANDA, J, MARTINEZ, E. (1994). "NODULATING ABILITY OF Rhizobium-tropici IS CONDITIONED BY A PLASMID-ENCODED CITRATE SYNTHASE". Molecular Microbiology. 11(2):315-321. [doi:10.1111/j.1365-2958.1994.tb00311.x]8170393
1994Spaink, H, Bloemberg, G, Wijfjes, A, Ritsema, T, López Lara, I, Geiger, O, Harteveld, M, Kafetzopoulos, D, van Brussel, A, Kijne, J, Lugtenberg, B, van der Drift, K, Thomas-Oates, J, Potrykus, I, Sautter, C. (1994). "The molecular basis of host specificity in the Rhizobium leguminosarum-plant interaction". Advances in Molecular Genetics of Plant-Microbe Interactions. Vol. 3 Proceedings of the 7th International Symposium on Molecular Plant-Microbe Interactions, Edinburgh, U.K., June 1994. 3():91-98. [doi:10.1007/978-94-011-0177-6]
1993POUPOT, R, MARTINEZROMERO, E, PROME, J. (1993). "Nodulation Factors from Rhizobium tropici Are Sulfated or Nonsulfated Chitopentasaccharides Containing an N-Methyl-N-acylglucosaminyl Terminus". Biochemistry. 32(39):10430-10435. [doi:10.1021/bi00090a019]8399187
1993CALDERON, J, MARTINEZ, L. (1993). "REGULATION OF AMMONIUM ION ASSIMILATION ENZYMES IN NEUROSPORA-CRASSA nit-2 AND ms-5 MUTANT STRAINS". BIOCHEMICAL GENETICS. 31(9-10):425-439. [doi:10.1007/BF00553459]7907211
1993MORETT, E, SEGOVIA, L. (1993). "THE SIGMA(54) BACTERIAL ENHANCER-BINDING PROTEIN FAMILY - MECHANISM OF ACTION AND PHYLOGENETIC RELATIONSHIP OF THEIR FUNCTIONAL DOMAINS". Journal Of Bacteriology. 175(19):6067-6074. [doi:10.1128/jb.175.19.6067-6074.1993]8407777
1993FUENTES, S, SUAREZ, R, VILLEGAS, T, ACERO, L, HERNANDEZ, G. (1993). "EMBRYOGENIC RESPONSE OF MEXICAN ALFALFA (Medicago-sativa) VARIETIES". Plant Cell Tissue And Organ Culture. 34(3):299-302. [doi:10.1007/BF00029720]
1993Flores López, M, Brom Klanner, S, Stepkowsky, T, Girard Cuesy, M, Dávila Ramos, J, Romero Camarena, D, Palacios de la Lama, R. (1993). "Gene amplification in Rhizobium: Identification and in vivo cloning of discrete amplifiable DNA regions (amplicons) from Rhizobium leguminosarum biovar phaseoli". PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 90(11):4932-4936. [doi:10.1073/pnas.90.11.4932]8506337
1993López Lara, I, Orgambide, G, Dazzo, F, Olivares, J, Toro, N. (1993). "Characterization and symbiotic importance of acidic extracellular polysaccharides of Rhizobium sp. strain GRH2 isolated from Acacia nodules". Journal Of Bacteriology. 175(10):2826-2832. [doi:10.1128/jb.175.10.2826-2832.1993]8491702
1993Segovia, L, Young, J, MartinezRomero, E. (1993). "Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov.". INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY. 43(2):374-377. [doi:10.1099/00207713-43-2-374]8494746
1993COLLADOVIDES, J. (1993). "A linguistic representation of the regulation of transcription initiation. I. An ordered array of complex symbols with distinctive features". Biosystems. 29(2-3):87-104. [doi:10.1016/0303-2647(93)90086-R]8374070
1993COLLADOVIDES, J. (1993). "A linguistic representation of the regulation of transcription initiation. II. Distinctive features of sigma 70 promoters and their regulatory binding sites". Biosystems. 29(2-3):105-128. [doi:10.1016/0303-2647(93)90087-S]8374063
1992BROM, S, DELOSSANTOS, A, STEPKOWSKI, T, FLORES, M, DAVILA, G, ROMERO, D, PALACIOS, R. (1992). "DIFFERENT PLASMIDS OF Rhizobium-leguminosarum BV phaseoli ARE REQUIRED FOR OPTIMAL SYMBIOTIC PERFORMANCE". Journal Of Bacteriology. 174(16):5183-5189. [doi:10.1128/jb.174.16.5183-5189.1992]1644746
1992ILANGOVAN, K, SALAZAR, M, DASH, S, MONROY, O, RAMOS, C. (1992). "INTERACTION OF CADMIUM, COPPER AND ZINC IN CHLORELLA-PYRENOIDOSA CHICK". ENVIRONMENTAL TECHNOLOGY. 13(2):195-199. [doi:10.1080/09593339209385144]
1992Soto, M, Lepek, V, López-Lara, I, Olivares, J, Toro, N. (1992). "Characterization of a Rhizobium meliloti ndvB Mutant and a Symbiotic Revertant that Regains Wild-Type Properties". Molecular Plant-Microbe Interactions. 5(4):288-293. [doi:10.1094/MPMI-5-288]
1992Morales, L, Garduñojuárez, R, Romero, D. (1992). "The multiple-minima problem in small peptides revisited. The threshold accepting approach". J BIOMOL STRUCT DYN. 9(5):951-957. [doi:10.1080/07391102.1992.10507969]1524708
1991LARAOCHOA, F, LARAMORENO, E. (1991). "A DYNAMIC-MODEL FOR PHASE-TRANSITIONS OF LIPIDS INDUCED BY CALCIUM-IONS". JOURNAL OF THEORETICAL BIOLOGY. 148(3):295-304. [doi:10.1016/S0022-5193(05)80239-5]2016896
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