Functional Genomics of Prokaryotes

PROGRAM OF FUNCTIONAL GENOMICS OF PROKARYOTES
Dr. Michael Dunn´s group. Carbon and nitrogen metabolism of rhizobia, specially the biochemical characterization of anaplerotic enzymes from the tricarboxylic acids cycle, such as Pyruvate carboxylase, Pyruvate dehydrogenase and Phosphoenolpyruvate carboxylase.
Dr. Sergio Encarnación´s group. This group was pioneer in the field of proteomics in Mexico and Latin America. This tool has been used to characterize the metabolism of several strains of rhizobia, in free living and in symbiosis with legumes; as also in the formation of biofilms and in stress.
Dr. Jaime Mora´s group. The carbon and nitrogen metabolism of rhizobia, the physiological characterization of growth and the requirement of the vitamins biotin and thiamine, the sensing of metabolites (extra or intracellular) by the receptor tar and its influence on growth. Also, study of genomics and evolution.

Group Staff

NamePositionCategoryEmailTelephone
Jaime Mora CelisResearcherEmeritus Professorjmora@ccg.unam.mx(777) 3291687
Sergio Manuel Encarnación GuevaraResearcherFull Professorencarnac@ccg.unam.mx777) 3291899
Michael Frederick Dunn ResearcherAssociate Professormike@ccg.unam.mx(777) 3139944
Omar Alejandro Aguilar VeraLaboratory TechnicianLaboratory Technicianaaguilar@ccg.unam.mx(777) 3139944
Sandra Contreras MartínezLaboratory TechnicianLaboratory Techniciansandra@ccg.unam.mx(777) 3114662
Rafael Díaz MendezLaboratory TechnicianLaboratory Technicianrdiaz@ccg.unam.mx(777) 3139944
Magdalena Hernández OrtizLaboratory TechnicianLaboratory Technicianmagda@ccg.unam.mx(777) 3139944
Humberto Peralta DíazLaboratory TechnicianLaboratory Technicianperalta@ccg.unam.mx(777) 3290865
María del Carmen Vargas LagunasLaboratory TechnicianLaboratory Techniciancvargas@ccg.unam.mx(777) 3139944
Hermenegildo Taboada CastroLaboratory TechnicianLaboratory Technicianhtaboada@ccg.unam.mx(777) 3290898
Oliver Castillo QuevedoSupport staffUNAMolivercq@ccg.unam.mx(777) 3291687
Ángel Gabriel Martínez BatallarSupport staffUNAMangelmb@ccg.unam.mx(777) 3139944

Group Publications

YearPublicationPMID
2018Becerra-Rivera, V.A., Bergström, E., Thomas-Oates, J., Dunn, M.F. (2018) Polyamines are required for normal growth in sinorhizobium meliloti MICROBIOLOGY-SGM 164(4):600-613 [doi:10.1099/mic.0.000615]29619919
2018Toledo-Leyva, Alfredo, Cesar Villegas-Pineda, Julio, Encarnacion-Guevara, Sergio, Gallardo-Rincon, Dolores, Talamas-Rohana, Patricia (2018) Effect of ovarian cancer ascites on SKOV-3 cells proteome: new proteins associated with aggressive phenotype in epithelial ovarian cancer Proteome Science 16():3- [doi:10.1186/s12953-018-0133-9]29456457
2017Gil J, Ramírez-Torres A, Chiappe D, Luna-Peñaloza J, Fernandez-Reyes FC, Arcos-Encarnación B, Contreras S, Encarnación-Guevara S (2017) Lysine acetylation stoichiometry and proteomics analyses reveal pathways regulated by sirtuin 1 in human cells Journal Of Biological Chemistry 292(44):18129-18144 [doi:10.1074/jbc.M117.784546]28893905
2017Meneses, N., Taboada, H., Dunn, M.F., Vargas, M.d.C., Buchs, N., Heller, M., Encarnación, S. (2017) The naringenin-induced exoproteome of Rhizobium etli CE3 Archives Of Microbiology 199(5):737-755 [doi:10.1007/s00203-017-1351-8]28255691
2017Hernandez-Vargas, Maria J., Gil, Jeovanis, Lozano, Luis, Pedraza-Escalona, Martha, Ortiz, Ernesto, Encarnacion-Guevara, Sergio, Alagon, Alejandro, Corzo, Gerardo (2017) Proteomic and transcriptomic analysis of saliva components from the hematophagous reduviid Triatoma pallidipennis Journal Of Proteomics 162():30-39 [doi:10.1016/j.jprot.2017.04.022]28442446
2017Gamez-Reyes, Aurora, Becerra-Lobato, Noe, Augusto Ramirez-Trujillo, Jose, Martinez-Romero, Esperanza, Dunn, Michael F., Hernandez-Lucas, Ismael (2017) The Rhizobium leucaenae CFN 299 pSym plasmid contains genes expressed in free life and symbiosis, as well as two replication systems ANNALS OF MICROBIOLOGY 67(3):263-273 [doi:10.1007/s13213-017-1257-3]
2017Garcia-Gomez, Elizabeth, Jaso-Vera, Marcos E., Juarez-Verdayes, Marco A., Alcantar-Curiel, Maria D., Zenteno, Juan C., Betanzos-Cabrera, Gabriel, Peralta, Humberto, Rodriguez-Martinez, Sandra, Cancino-Diaz, Mario E., Jan-Roblero, Janet, Cancino-Diaz, Juan C. (2017) The (95 Delta)G mutation in the 5'untranslated region of the norA gene increases efflux activity in Staphylococcus epidermidis isolates Microbial Pathogenesis 103():139-148 [doi:10.1016/j.micpath.2016.12.021]28017900
2017Gil, Jeovanis, Ramirez-Torres, Alberto, Encarnacion-Guevara, Sergio (2017) Lysine acetylation and cancer: A proteomics perspective Journal Of Proteomics 150():297-309 [doi:10.1016/j.jprot.2016.10.003]27746255
2017Vargas-Lagunas, Carmen, Mora, Yolanda, Diaz, Rafael, Martinez-Batallar, Gabriel, Girard, Lourdes, Encarnacion, Sergio, Peralta, Humberto, Mora, Jaime (2017) Overproduction of Sinorhizobium meliloti ArgC (N-acetyl-gamma-glutamyl phosphate reductase) promotes growth delay and inefficient nodules Fems Microbiology Letters 364(23):fnx233- [doi:10.1093/femsle/fnx233]29121239
2017Patiño-Lopez G., Encarnación-Guevara S. (2017) Clinical Proteomics in Mexico: where do we stand? Boletin Medico del Hospital Infantil de Mexico 74(3):173-174 [doi:10.1016/j.bmhimx.2017.04.001]29382483
2017Encarnación-Guevara S. (2017) The dawn and the first twenty-five years of proteomics in Mexico: a personal chronicle Boletin Medico del Hospital Infantil de Mexico 74(3):208-211 [doi:10.1016/j.bmhimx.2017.03.006]29382488
2017Herrera Y., Contreras S., Hernández M., Álvarez L., Mora Y., Encarnación-Guevara S. (2017) Displacers improve the selectivity of phosphopeptide enrichment by metal oxide affinity chromatography Boletin Medico del Hospital Infantil de Mexico 74(3):200-207 [doi:10.1016/j.bmhimx.2017.03.008]29382487
2016Reyes-Perez, Agustin, del Carmen Vargas, Maria, Hernandez, Magdalena, Aguirre-von-Wobeser, Eneas, Perez-Rueda, Ernesto, Encarnacion, Sergio (2016) Transcriptomic analysis of the process of biofilm formation in Rhizobium etli CFN42 Archives Of Microbiology 198(9):847-860 [doi:10.1007/s00203-016-1241-5]27226009
2016Aguilar A, Peralta H, Mora Y, Díaz R, Vargas-Lagunas C, Girard L, Mora J (2016) Genomic Comparison of Agrobacterium pusense Strains Isolated from Bean Nodules Frontiers in Microbiology 7():1720-1720 [doi:10.3389/fmicb.2016.01720]27833604
2016Alvarado-Delgado A, Perales Ortiz G, Tello-López ÁT, Encarnación S, Conde R, Martínez-Batallar ÁG, Moran-Francia K, Lanz-Mendoza H (2016) Infection with Plasmodium berghei ookinetes alters protein expression in the brain of Anopheles albimanus mosquitoes PARASITES & VECTORS 9(1):542-542 [doi:10.1186/s13071-016-1830-9]27724938
2016Peralta H, Aguilar A, Díaz R, Mora Y, Martínez-Batallar G, Salazar E, Vargas-Lagunas C, Martínez E, Encarnación S, Girard L, Mora J (2016) Genomic studies of nitrogen-fixing rhizobial strains from Phaseolus vulgaris seeds and nodules Bmc Genomics 17():711-711 [doi:10.1186/s12864-016-3053-z]27601031
2016Alfonso-Gordillo, Guadalupe, Cristiani-Urbina, Eliseo, Mateo Flores-Ortiz, Cesar, Peralta, Humberto, Carlos Cancino-Diaz, Juan, Antonio Cruz-Maya, Juan, Jan-Roblero, Janet (2016) Stenotrophomonas maltophilia isolated from gasoline-contaminated soil is capable of degrading methyl tert-butyl ether ELECTRONIC JOURNAL OF BIOTECHNOLOGY 23():12-20 [doi:10.1016/j.ejbt.2016.06.006]
2016Santillán O, Ramírez-Romero MA, Lozano L, Checa A, Encarnación SM, Dávila G (2016) Region 4 of Rhizobium etli Primary Sigma Factor (SigA) Confers Transcriptional Laxity in Escherichia coli Frontiers in Microbiology 7():1078-1078 [doi:10.3389/fmicb.2016.01078]27468278
2016Yadira Lopez-Chavez, Mariana, Guillen-Navarro, Karina, Bertolini, Vincenzo, Encarnacion, Sergio, Hernandez-Ortiz, Magdalena, Sanchez-Moreno, Irene, Damon, Anne (2016) Proteomic and morphometric study of the in vitro interaction between Oncidium sphacelatum Lindl. (Orchidaceae) and Thanatephorus sp RG26 (Ceratobasidiaceae) Mycorrhiza 26(5):353-365 [doi:10.1007/s00572-015-0676-x]26732875
2016Diener C, Muñoz-Gonzalez F, Encarnación S, Resendis-Antonio O (2016) The space of enzyme regulation in HeLa cells can be inferred from its intracellular metabolome SCIENTIFIC REPORTS 6():28415-28415 [doi:10.1038/srep28415]27335086
2016Augusto Ramirez-Trujillo, Jose, Dunn, Michael F., Suarez-Rodriguez, Ramon, Hernandez-Lucas, Ismael (2016) The Sinorhizobium meliloti glyoxylate cycle enzyme isocitrate lyase (AceA) is required for the utilization of poly-beta-hydroxybutyrate during carbon starvation ANNALS OF MICROBIOLOGY 66(2):921-924 [doi:10.1007/s13213-015-1131-0]
2016Moreno Castillo, Benjamin, Dunn, Michael F., Guillen Navarro, Karina, Holguin Melendez, Francisco, Hernandez Ortiz, Magdalena, Encarnacion Guevara, Sergio, Huerta Palacios, Graciela (2016) Antifungal performance of extracellular chitinases and culture supernatants of Streptomyces galilaeus CFFSUR-B12 against Mycosphaerella fijiensis Morelet World Journal Of Microbiology & Biotechnology 32(3):44- [doi:10.1007/s11274-015-1993-0]26873555
2016Guzman-Flores, Juan M., Flores-Perez, Elsa C., Hernandez-Ortiz, Magdalena, Lopez-Briones, Sergio, Ramirez-Emiliano, Joel, Encarnacion-Guevara, Sergio, Perez-Vazquez, Victoriano (2016) Comparative Proteomics of Liver of the Diabetic Obese db/db and Non-Obese or Diabetic Mice Current Proteomics 13(3):231-236 [doi:10.2174/1570164613666160722102430]
2015Frederick Dunn, Michael (2015) Key roles of microsymbiont amino acid metabolism in rhizobia-legume interactions Critical Reviews in Microbiology 41(4):411-451 [doi:10.3109/1040841X.2013.856854]24601835
2015Ormeño-Orrillo, E., Servín-Garcidueñas, L.E., Rogel, M.A., González, V., Peralta, H., Mora, J., Martínez-Romero, J., Martínez-Romero, E. (2015) Taxonomy of rhizobia and agrobacteria from the Rhizobiaceae family in light of genomics Systematic And Applied Microbiology 38(4):287-291 [doi:10.1016/j.syapm.2014.12.002]25660942
2015Ramon-Perez, Miriam L., Diaz-Cedillo, Francisco, Contreras-Rodriguez, Araceli, Betanzos-Cabrera, Gabriel, Peralta, Humberto, Rodriguez-Martinez, Sandra, Cancino-Diaz, Mario E., Jan-Roblero, Janet, Cancino Diaz, Juan C. (2015) Different sensitivity levels to norspermidine on biofilm formation in clinical and commensal Staphylococcus epidermidis strains Microbial Pathogenesis 79():8-16 [doi:10.1016/j.micpath.2014.12.004]25549879
2015Hernandez, Victor M., Girard, Lourdes, Hernandez-Lucas, Ismael, Vazquez, Alejandra, Ortiz-Ortiz, Catalina, Diaz, Rafael, Dunn, Michael F. (2015) Genetic and biochemical characterization of arginine biosynthesis in Sinorhizobium meliloti 1021 MICROBIOLOGY-SGM 161(8):1671-1682 [doi:10.1099/mic.0.000122]26271664
2015Ingrid Gutierrez-Roman, Martha, Holguin-Melendez, Francisco, Dunn, Michael F., Guillen-Navarro, Karina, Huerta-Palacios, Graciela (2015) Antifungal activity of Serratia marcescens CFFSUR-B2 purified chitinolytic enzymes and prodigiosin against Mycosphaerella fijiensis, causal agent of black Sigatoka in banana (Musa spp.) Biocontrol 60(4):565-572 [doi:10.1007/s10526-015-9655-6]
2014de Luna-Valdez, L. A., Martinez-Batallar, A. G., Hernandez-Ortiz, M., Encarnacion-Gueuara, S., Ramos-Vega, M., Lopez-Bucio, J. S., Leon, P., Guevara-Garcia, A. A. (2014) Proteomic analysis of chloroplast biogenesis (clb) mutants uncovers novel proteins potentially involved in the development of Arabidopsis thaliana chloroplasts Journal Of Proteomics 111(SI):148-164 [doi:10.1016/j.jprot.2014.07.003]25154054
2014Trejo-Hernandez, Abigail, Andrade-Dominguez, Andres, Hernandez, Magdalena, Encarnacion, Sergio (2014) Interspecies competition triggers virulence and mutability in Candida albicans-Pseudomonas aeruginosa mixed biofilms Isme Journal 8(10):1974-1988 [doi:10.1038/ismej.2014.53]24739628
2014Mora, Yolanda, Diaz, Rafael, Vargas-Lagunas, Carmen, Peralta, Humberto, Guerrero, Gabriela, Aguilar, Alejandro, Encarnacion, Sergio, Girard, Lourdes, Mora, Jaime (2014) Nitrogen-Fixing Rhizobial Strains Isolated from Common Bean Seeds: Phylogeny, Physiology, and Genome Analysis Applied And Environmental Microbiology 80(18):5644-5654 [doi:10.1128/AEM.01491-14]25002426
2014Villarreal, J.M., Becerra-Lobato, N., Rebollar-Flores, J.E., Medina-Aparicio, L., Carbajal-Gómez, E., Zavala-Garcia, M.L., Vázquez, A, Gutierrez-Ríos, R.M., Encarnación Guevara, Sergio Manuel, Martínez Batallar, Ángel Gabriel, Calva, E., Hernández-Lucas, I. (2014) The Salmonella enterica serovar Typhi ltrR-ompR-ompC-ompF genes are involved in resistance to the bile salt sodium deoxycholate and in bacterial transformation Molecular Microbiology 92(5):1005-1024 [doi:10.1111/mmi.12610]24720747
2014Pérez-Vázquez, V., Guzmán-Flores, J.M., Mares-Alvarez, D., Hernández Ortiz, Magdalena, Macias-Cervantes, M.H., Ramírez-Emiliano, J., Encarnación Guevara, Sergio Manuel (2014) Differential Proteomic Analysis of the Pancreas of Diabetic db/db Mice Reveals the Proteins Involved in the Development of Complications of Diabetes Mellitus International Journal Of Molecular Sciences 15(6):9579-9593 [doi:10.3390/ijms15069579]24886809
2014Andrade Domínguez, Andrés, Salazar Bustamante, Emmanuel, Vargas Lagunas, María del Carmen, Kolter, R., Encarnación Guevara, Sergio Manuel (2014) Eco-evolutionary feedbacks drive species interactions Isme Journal 8(5):1041-1054 [doi:10.1038/ismej.2013.208]24304674
2014Rosas Pérez, Tania, Rosenblueth Laguette, Mónica Teresa, Rincón-Rosales, R., Mora Celis, Jaime, Martínez Romero, María Esperanza (2014) Genome Sequence of "Candidatus Walczuchella monophlebidarum" the Flavobacterial Endosymbiont of Llaveia axin axin (Hemiptera: Coccoidea: Monophlebidae) Genome Biology And Evolution 6(3):714-726 [doi:10.1093/gbe/evu049]24610838
2014Cocotl-Yañez, M., Moreno, S., Encarnación Guevara, Sergio Manuel, López-Pliego, L., Castañeda, M., Espín, G. (2014) A small heat-shock protein (Hsp20) regulated by RpoS is essential for cyst desiccation resistance in Azotobacter vinelandii MICROBIOLOGY-SGM 160(3):479-487 [doi:10.1099/mic.0.073353-0]24385478
2014Garibay-Cerdenares, O.L., Hernández-Ramírez, V.I., Osorio-Trujillo, J.C., Hernández Ortiz, Magdalena, Gallardo-Rincón, D., Cantú de León, D., Encarnación Guevara, Sergio Manuel, Villegas-Pineda, J.C., Talamas-Rohana, P. (2014) Proteomic identification of fucosylated haptoglobin alpha isoforms in ascitic fluids and its localization in ovarian carcinoma tissues from Mexican patients Journal Of Ovarian Research 7(1):27-27 [doi:10.1186/1757-2215-7-27]24576319
2014Althabegoiti, M.J., Ormeño Orrillo, Ernesto Aldo, LOZANO AGUIRRE BELTRÁN, Luis Fernando, Tejerizo, G.T., Rogel Hernández, Marco Antonio, Mora Celis, Jaime, Martínez Romero, María Esperanza (2014) Characterization of Rhizobium grahamii extrachromosomal replicons and their transfer among rhizobia Bmc Microbiology 14():6-6 [doi:10.1186/1471-2180-14-6]24397311
2014Gutiérrez-Roman, M.I., Dunn, Michael Frederick, Tinoco-Valencia, R., Holguin-Melendez, F., Huerta-Palacios, G., Guillen-Navarro, K. (2014) Potentiation of the synergistic activities of chitinases ChiA, ChiB and ChiC from Serratia marcescens CFFSUR-B2 by chitobiase (Chb) and chitin binding protein (CBP) World Journal Of Microbiology & Biotechnology 30(1):33-42 [doi:10.1007/s11274-013-1421-2]23824666
2013Esparza-Garrido, R.R., Velazquez-Flores, M.A., Diegoperez-Ramírez, J., López-Aguilar, E., Siordia-Reyes, G., Hernández Ortiz, Magdalena, Martínez Batallar, Ángel Gabriel, Encarnación Guevara, Sergio Manuel, Salamanca-Gomez, F., Arenas-Aranda, D.J. (2013) A proteomic approach of pediatric astrocytomas: MiRNAs and network insight Journal Of Proteomics 94():162-175 [doi:10.1016/j.jprot.2013.09.009]24060999
2013Martínez Aguilar, Lourdes, Salazar-Salazar, C., Díaz Mendez, Rafael, Caballero Mellado, José de Jesús, Hirsch, A.M., Vasquez-Murrieta, M.S., Estrada De Los Santos, Paulina (2013) Burkholderia caballeronis sp nov., a nitrogen fixing species isolated from tomato (Lycopersicon esculentum) with the ability to effectively nodulate Phaseolus vulgaris ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR; MICROBIOLOGY 104(6):1063-1071 [doi:10.1007/s10482-013-0028-9]24057982
2013Ramírez Yáñez, Mario, Guillén, G., Fuentes Membreño, Sara Isabel, Iñiguez Rabago, Luis Pedro, Aparicio Fabre, Rosaura, Zamorano Sánchez, David Salvador, Encarnación Guevara, Sergio Manuel, Panzeri, D., Castiglioni, B., Cremonesi, P., Strozzi, F., Stella, A., Girard Cuesy, María de Lourdes, Sparvoli, F., Hernández Delgado, Georgina (2013) Transcript profiling of common bean nodules subjected to oxidative stress Physiologia Plantarum 149(3):389-407 [doi:10.1111/ppl.12040]23432573
2013Rodríguez-Cruz, M., Coral-Vázquez, R.M., Hernández-Stengele, G., Sánchez, R., Salazar Bustamante, Emmanuel, Sánchez-Muñoz, F., Encarnación Guevara, Sergio Manuel, Ramirez-Salcedo, J. (2013) Identification of Putative Ortholog Gene Blocks Involved in Gestant and Lactating Mammary Gland Development: A Rodent Cross- Species Microarray Transcriptomics Approach International Journal of Genomics 2013():624681-624681 [doi:10.1155/2013/624681]24288657
2013Higareda Almaraz, Juan Carlos, Valtierra Gutiérrez, Ilse Ariadna, Hernández Ortiz, Magdalena, Contreras Martínez, Sandra, Hernádez, E., Encarnación Guevara, Sergio Manuel (2013) Analysis and Prediction of Pathways in HeLa Cells by Integrating Biological Levels of Organization with Systems-Biology Approaches Plos One 8(6):UNSP e65433- [doi:10.1371/journal.pone.0065433]23785426
2013de Luna,L. A., León, P., Encarnación Guevara, Sergio Manuel, Guevara-García, A. A. (2013) Chloroplast omics Barh Delmya ():-
2013Gutiérrez-Román, M. I., Dunn, Michael Frederick, Tinoco-Valencia, F., Holguín-Meléndez, K., Guillen Navarro, Griselda Karina, Huerta-Palacios, G. (2013) Antifungal activity of chitinases (ChiA, ChiC and ChiB) produced by Serratia marcescens CFFSUR-B2 against Mycosphaerella fijiensis causal agent of black sigatoka in banana (Musa spp.) Acta Phytopathol 43():96-
2012Resendis Antonio, Osbaldo, Hernández Ortiz, Magdalena, Pérez-Tejada Domínguez, Yolanda, Encarnación Guevara, Sergio Manuel (2012) Functional Modules, Structural Topology, and Optimal Activity in Metabolic Networks Plos Computational Biology 8(10):1002720- [doi:10.1371/journal.pcbi.1002720]23071431
2012Juárez-Verdayes, M.A., González-Uribe, P.M., Peralta Díaz, Humberto, Rodríguez-Martínez, S., Jan-Roblero, J., Escamilla-Hernández, R., Cancino-Díaz, M.E., Cancino-Díaz, J.C. (2012) Detection of hssS, hssR, hrtA, and hrtB genes and their expression by hemin in Staphylococcus epidermidis Canadian Journal Of Microbiology 58(9):1063-1072 [doi:10.1139/W2012-086]22906238
2012Sánchez, D.G., Otero, L.H., Hernández Ortiz, Magdalena, Serra, A.L., Encarnación Guevara, Sergio Manuel, Domenech, C.E., Lisa, A.T. (2012) A Pseudomonas aeruginosa PA01 acetylcholinesterase is encoded by the PA4921 gene and belongs to the SGNH hydrolase family Microbiological Research 167(6):317-325 [doi:10.1016/j.micres.2011.11.005]22192836
2012Chino-Flores, C., Dantan-González, E., Vázquez-Ramos, A., Tinoco-Valencia, R., Díaz Mendez, Rafael, Sánchez-Salinas, E., Castrejón-Godinez, M.L., Ramos-Quintana, F., Ortíz-Hernandez, M.L. (2012) Isolation of the opdE gene that encodes for a new hydrolase of Enterobacter sp capable of degrading organophosphorus pesticides Biodegradation 23(3):387-397 [doi:10.1007/s10532-011-9517-6]22065283
2012Cancino-Rodezno, A., LOZANO AGUIRRE BELTRÁN, Luis Fernando, Oppert, C., Castro, J.I., Lanz-Mendoza, H., Encarnación Guevara, Sergio Manuel, Evans, A.E., Gill, S.S., Soberon, M., Jurat-Fuentes, J.L., Bravo, A. (2012) Comparative Proteomic Analysis of Aedes aegypti Larval Midgut after Intoxication with Cry11Aa Toxin from Bacillus thuringiensis Plos One 7(5, 1):37034- [doi:10.1371/journal.pone.0037034]22615881
2012Martínez-Gómez, K., Flores, N., Castañeda, H.M., Martínez Batallar, Ángel Gabriel, Hernández-Chávez, G., Ramírez, O.T., Gosset, G., Encarnación Guevara, Sergio Manuel, Bolivar, F. (2012) New insights into Escherichia coli metabolism: carbon scavenging, acetate metabolism and carbon recycling responses during growth on glycerol Microbial Cell Factories 11():46-46 [doi:10.1186/1475-2859-11-46]22513097
2012Gutiérrez-Roman, M.I., Holguin-Melendez, F., Bello-Mendoza, R., Guillén-Navarro, K., Dunn, Michael Frederick, Huerta-Palacios, G. (2012) Production of prodigiosin and chitinases by tropical Serratia marcescens strains with potential to control plant pathogens World Journal Of Microbiology & Biotechnology 28(1):145-153 [doi:10.1007/s11274-011-0803-6]22806790
2012Ávila-Calderón, E.D., López-Merino, A.E., Jain, N., Peralta, H, López-Villegas, E.O., Sriranganathan, N., Boyle, S.M., Witonsky, S., Contreras-RodrÍguez, A. (2012) Characterization of OuterMembrane Vesicles from Brucella melitensis and Protection Induced in Mice CLINICAL & DEVELOPMENTAL IMMUNOLOGY 2012():352493-352493 [doi:10.1155/2012/352493]22242036
2011Peralta Díaz, Humberto, Guerrero Ruiz, Maria Gabriela, Aguilar Vera, Omar Alejandro, Mora Celis, Jaime (2011) Sequence variability of Rhizobiales orthologs and relationship with physico-chemical characteristics of proteins Biology Direct 6():48-48 [doi:10.1186/1745-6150-6-48]21970442
2011Resendis Antonio, Osbaldo, Hernández Ortiz, Magdalena, Salazar Bustamante, Emmanuel, Contreras Martínez, Sandra, Martínez Batallar, Ángel Gabriel, Pérez-Tejada Domínguez, Yolanda, Encarnación Guevara, Sergio Manuel (2011) Systems biology of bacterial nitrogen fixation: High-throughput technology and its integrative description with constraint-based modeling Bmc Systems Biology 5():120-120 [doi:10.1186/1752-0509-5-120]21801415
2011Higareda Almaraz, Juan Carlos, Enríquez Gasca, María del Rocío, Hernández Ortiz, Magdalena, Resendis Antonio, Osbaldo, Encarnación Guevara, Sergio Manuel (2011) Proteomic patterns of cervical cancer cell lines, a network perspective Bmc Systems Biology 5():96-96 [doi:10.1186/1752-0509-5-96]21696634
2011Dunn, Michael F. (2011) Anaplerotic Function of Phosphoenolpyruvate Carboxylase in Bradyrhizobium japonicum USDA110 Current Microbiology 62(6):1782-1788 [doi:10.1007/s00284-011-9928-y]21479798
2011Gómez Hernández, Nicolás, Reyes González, Alma Ruth, Sanchez, C., Pérez-Tejada Domínguez, Yolanda, Delgado, M.J., Girard Cuesy, María de Lourdes (2011) Regulation and Symbiotic Role of nirK and norC Expression in Rhizobium etli Molecular Plant-Microbe Interactions 24(2):233-245 [doi:10.1094/MPMI-07-10-0173]21043576
2011Díaz Mendez, Rafael, Vargas Lagunas, María del Carmen, Villalobos López, Miguel Angel, Peralta Díaz, Humberto, Pérez-Tejada Domínguez, Yolanda, Encarnación Guevara, Sergio Manuel, Girard Cuesy, María de Lourdes, Mora Celis, Jaime (2011) argC Orthologs from Rhizobiales Show Diverse Profiles of Transcriptional Efficiency and Functionality in Sinorhizobium meliloti Journal Of Bacteriology 193(2):460-472 [doi:10.1128/JB.01010-10]21075924
2010Meneses Moreno, Niurka, Mendonza-Hernández, G., Encarnación Guevara, Sergio Manuel (2010) The extracellular proteome of Rhizobium etli CE3 in exponential and stationary growth phase Proteome Science 8():51-51 [doi:10.1186/1477-5956-8-51]20942974
2010Resendis-Antonio, Osbaldo, Checa, Alberto, Encarnacion, Sergio (2010) Modeling Core Metabolism in Cancer Cells: Surveying the Topology Underlying the Warburg Effect Plos One 5(8):e12383- [doi:10.1371/journal.pone.0012383]20811631
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2007Resendis Antonio, Osbaldo, Reed, J.L., Encarnación Guevara, Sergio Manuel, Collado Vides, Pedro Julio, Palsson, B.O. (2007) Metabolic reconstruction and Modeling of nitrogen fixation in rhizobium etli Plos Computational Biology 3(10):1887-1895 [doi:10.1371/journal.pcbi.0030192]17922569
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2005Vargas Lagunas, María del Carmen, Encarnación Guevara, Sergio Manuel, Girard Cuesy, María de Lourdes, Reyes Pérez, Agustín, Pérez-Tejada Domínguez, Yolanda, Mora Celis, Jaime (2005) Characterization of the alternative protection programs against oxidative-stress in free life and simbiosis from Rhizobium etli Current Plant Science and Biotechnology. Agriculture Biological Nitrogen Fixation, Sustainable Agriculture and the Environment 41():331-
2005Chavéz-Zamora, J.C., Salazar Bustamante, Emmanuel, Encarnación Guevara, Sergio Manuel (2005) Global analisis of the genome expresion in Sinorhizobium meliloti strain 1021, using microarray Current Plant Science and Biotechnology. Agriculture Biological Nitrogen Fixation, Sustainable Agriculture and the Environment 41():331-
2004Vargas, M. del C., Encarnacin, S., Girard, M. de L., Reyes, A., Mora, Y., Mora, J. (2004) Physiological and proteome characterizations of oxidative-stress response in Rhizobium etli during free life and symbiosis with Phaseolus vulgaris. MOLECULAR & CELLULAR PROTEOMICS 3(10, S):160-160
2004Encarnacion, Sergio, Garcia, Juan, Hernandez, Magdalena, Vargas, Maria del Carmen, Contreras, Sandra, Mora, Jaime (2004) Protein expression during biofilm formation in Rhizobium etli and Sinorhizobium meliloti MOLECULAR & CELLULAR PROTEOMICS 3(10, S):150-150
2004Peralta, H, Mora, Y, Salazar, E, Encarnacion, S, Palacios, R, Mora, J (2004) Engineering the nifH promoter region and abolishing poly-beta-hydroxybutyrate accumulation in Rhizobium etli enhance nitrogen fixation in symbiosis with Phaseolus vulgaris Applied And Environmental Microbiology 70(6):3272-3281 [doi:10.1128/AEM.70.6.3272-3281.2004]15184121
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2003Medina, G., Juarez, K., Diaz, R, Soberon-Chavez, Gloria (2003) Transcriptional regulation of Pseudomonas aeruginosa rhlR, encoding a quorum-sensing regulatory protein MICROBIOLOGY-SGM 149(11):3073-3081 [doi:10.1099/mic.0.26282-0]14600219
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2001Dunn, MF, Araiza, G, Finan, TM (2001) Cloning and characterization of the pyruvate carboxylase from Sinorhizobium meliloti Rm1021 Archives Of Microbiology 176(5):355-363 [doi:10.1007/s002030100336]11702077
2000Castillo, A, Taboada, H, Mendoza, A, Valderrama, B, Encarnacion, S, Mora, J (2000) Role of GOGAT in carbon and nitrogen partitioning in Rhizobium etli MICROBIOLOGY-SGM 146(7):1627-1637 [doi:10.1099/00221287-146-7-1627]10878127
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1998Encarnacion, S, Calderon, J, Gelbard, AS, Cooper, AJL, Mora, J (1998) Glutamine biosynthesis and the utilization of succinate and glutamine by Rhizobium etli and Sinorhizobium meliloti MICROBIOLOGY-SGM 144(9):2629-2638 [doi:10.1099/00221287-144-9-2629]9782512
1998Dunn, MF (1998) Tricarboxylic acid cycle and anaplerotic enzymes in rhizobia Fems Microbiology Reviews 22(2):105-123 [doi:10.1111/j.1574-6976.1998.tb00363.x]9729766
1998Mendoza, A, Valderrama, B, Leija, A, Mora, J (1998) NifA-dependent expression of glutamate dehydrogenase in Rhizobium etli modifies nitrogen partitioning during symbiosis Molecular Plant-Microbe Interactions 11(2):83-90 [doi:10.1094/MPMI.1998.11.2.83]9450332
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1997MirandaRios, J, Morera, C, Taboada, H, Davalos, A, Encarnacion, S, Mora, J, Soberon, M (1997) Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb(3), in Rhizobium etli Journal Of Bacteriology 179(22):6887-6893 [doi:10.1128/jb.179.22.6887-6893.1997]9371431
1996Dunn, MF, Encarnacion, S, Araiza, G, Vargas, MC, Davalos, A, Peralta, H, Mora, Y, Mora, J (1996) Pyruvate carboxylase from Rhizobium etli: Mutant characterization, nucleotide sequence, and physiological role Journal Of Bacteriology 178(20):5960-5970 [doi:10.1128/jb.178.20.5960-5970.1996]8830693
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1996Taboada, H, Encarnacion, S, Vargas, MD, Mora, Y, MartinezRomero, E, Mora, J (1996) Glutamine synthetase II constitutes a novel taxonomic marker in Rhizobium etli and other Rhizobium species INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY 46(2):485-491 [doi:10.1099/00207713-46-2-485]
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1995ENCARNACION, S, DUNN, M, WILLMS, K, MORA, J (1995) FERMENTATIVE AND AEROBIC METABOLISM IN RHIZOBIUM-ETLI Journal Of Bacteriology 177(11):3058-3066 [doi:10.1128/jb.177.11.3058-3066.1995]7768801
1990MORA, J (1990) GLUTAMINE-METABOLISM AND CYCLING IN NEUROSPORA-CRASSA MICROBIOLOGICAL REVIEWS 54(3):293-3042145504
1990CALDERON, J, MARTINEZ, LM, MORA, J (1990) ISOLATION AND CHARACTERIZATION OF A NEUROSPORA-CRASSA MUTANT ALTERED IN THE ALPHA-POLYPEPTIDE OF GLUTAMINE-SYNTHETASE Journal Of Bacteriology 172(9):4996-5000 [doi:10.1128/jb.172.9.4996-5000.1990]1975579
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1987MORA, Y, HERNANDEZ, G, MORA, J (1987) REGULATION OF CARBON AND NITROGEN FLOW BY GLUTAMATE SYNTHASE IN NEUROSPORA-CRASSA Journal Of General Microbiology 133(7):1667-1674 [doi:10.1099/00221287-133-7-1667]2959749
1986HERNANDEZ, G, MORA, J (1986) GLUTAMINE SYNTHESIS REGULATES SUCROSE CATABOLISM IN NEUROSPORA-CRASSA Journal Of General Microbiology 132(12):3315-3323
1986Leija, A, Ruíz-Herrera, J., MORA, J (1986) EFFECT OF L-AMINO-ACIDS ON MUCOR-ROUXII DIMORPHISM Journal Of Bacteriology 168(2):843-850 [doi:10.1128/jb.168.2.843-850.1986]3096961
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1985CALDERON, J, MORA, J (1985) GLUTAMINE CYCLING IN NEUROSPORA-CRASSA Journal Of General Microbiology 131(DEC):3237-3242
1983DAVILA, G, BROM, S, MORA, Y, PALACIOS, R, MORA, J (1983) GENETIC AND BIOCHEMICAL-CHARACTERIZATION OF GLUTAMINE-SYNTHETASE FROM NEUROSPORA-CRASSA GLUTAMINE AUXOTROPHS AND THEIR REVERTANTS Journal Of Bacteriology 156(3):993-10006139363
1983GONZALEZ, A, TENORIO, M, VACA, G, MORA, J (1983) NEUROSPORA-CRASSA MUTANT IMPAIRED IN GLUTAMINE REGULATION Journal Of Bacteriology 155(1):1-76134713
1983Hernandez, G, Sánchez-Pescador, R., PALACIOS, R, MORA, J (1983) NITROGEN-SOURCE REGULATES GLUTAMATE-DEHYDROGENASE NADP SYNTHESIS IN NEUROSPORA-CRASSA Journal Of Bacteriology 154(1):524-5286300039
1982LARA, M, BLANCO, L, CAMPOMANES, M, CALVA, E, PALACIOS, R, MORA, J (1982) PHYSIOLOGY OF AMMONIUM ASSIMILATION IN NEUROSPORA-CRASSA Journal Of Bacteriology 150(1):105-1126120927
1980Hummelt, Gisela, Mora Celis, Jaime (1980) REGULATION AND FUNCTION OF GLUTAMATE SYNTHASE IN NEUROSPORA-CRASSA BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 96(4):1688-1694 [doi:10.1016/0006-291X(80)91368-6]6449930