Recent Publications (12 months)
Publications
| # | Year | Title | Links |
| 1 | 2018 | Blanc, C., Coluccia, F., LHaridon, F., Torres, M., Ortíz-Berrocal, M., Stahl, E., Reymond, P., Schreiber, L., Nawrath, C., Metraux, J.P. and Serrano, M. (2018). "The Cuticle Mutant eca2 Modifies Plant Defense Responses to Biotrophic and Necrotrophic Pathogens and Herbivory Insects". Mol Plant Microbe Interactions. 31(3):344-355 | PUBMED: #29130376 |
| 2 | 2018 | Chen, L.X., Méndez-García, C., Dombrowski, N., Servín-Garcidueñas, L.E., Eloe-Fadrosh, E.A., Fang, B.Z., Luo, Z.H., Tan, S., Zhi, X.Y., Hua, Z.S., Martínez-Romero, E., Woyke, T., Huang, L.N., Sánchez, J., Peláez, A., Ferrer, M., Baker, B.J. and Shu, W.S. (2018). "Metabolic Versatility of Small Archaea Micrarchaeota and Parvarchaeota". Isme Journal. 12(3):756-775 | PUBMED: #29222443 |
| 3 | 2018 | Chiozzotto, R., Ramirez, M., Talbi, C., Cominelli, E., Girard, L., Sparvoli, F. and Hernández, G. (2018). "Characterization Of the Symbiotic Nitrogen-fixing Common Bean low phytic acid (lpa1) Mutant Response to Water Stress". Genes. 9(2) | |
| 4 | 2018 | Conde-Alvárez, R., Palacios-Cháves, L., Gil-Ramírez, Y., Salvador-Bescos, M., Barcena-Varela, M., Aragón-Aranda, B., Martínez-Gómez, E., Zuniga-Ripa, A., de Miguel, M.J., Bartholomew, T.L., Hanniffy, S., Grillo, M.J., Vences-Guzmán, M.Á., Bengoechea, J.A., Arce-Gorvel, V., Gorvel, J.P., Moriyon, I. and Iriarte, M. (2018). "Identification of lptA, lpxE, and lpxO, Three Genes Involved in the Remodeling of Brucella Cell Envelope". Frontiers in Microbiology. 8:-2657 | |
| 5 | 2018 | Kumar, K.M., Díaz, M.C., Hernández-Como, N., Hernández-Eligio, A., Torres-Torres, G., Godavarthi, S. and Gómez, L.M. (2018). "Green Synthesis of CE3+ Rich Ceo2 Nanoparticles and Its Antimicrobial Studies". Materials Letters. 214:15-19 | |
| 6 | 2018 | Martínez-Romero, E., Rodríguez-Medina, N., Beltrán-Rojel, M., Toribio-Jimenez, J. and Garza-Ramos, U. (2018). "Klebsiella Variicola and Klebsiella Quasipneumoniae With Capacity to Adapt to Clinical and Plant Settings". Salud Publica Mexico. 60(1):29-40 | |
| 7 | 2018 | Martínez-Romero, E., Rodríguez-Medina, N., Beltrán-Rojel, M., Silva-Sánchez, J., Barrios-Camacho, H., Pérez-Rueda, E. and Garza-Ramos, U. (2018). "Genome Misclassification Of Klebsiella Variicola and Klebsiella Quasipneumoniae Isolated from Plants, Animals and Humans". Salud Publica Mexico. 60(1):56-62 | |
| 8 | 2018 | Mendoza-Hoffmann, F., Pérez-Oseguera, A., Cevallos, M.A., Zarco-Zavala, M., Ortega, R., Peña-Segura, C., Espinoza-Simon, E., Uribe-Carvajal, S. and García-Trejo, J.J. (2018). "The Biological Role of the Zeta Subunit as Unidirectional Inhibitor of the F1FO-ATPase of Paracoccus denitrificans". Cell Reports. 22(4):1067-1078 | PUBMED: #29386127 |
| 9 | 2018 | Seulveda-Cisterna, I., Lozano, L., Flores, A.F., de Ovando, I.V.S. and García-Angulo, V.A. (2018). "Transcriptomics Reveals A Cross-modulatory Effect between Riboflavin and Iron and Outlines Responses to Riboflavin Biosynthesis and Uptake in Vibrio Cholerae". Sci Rep. 8:-3149 | PUBMED: #29453341 |
| 10 | 2018 | Solís-González, C.J., Domínguez-Malfavon, L., Vargas-Suárez, M., Gaytan, I., Cevallos, M.A., Lozano, L., Cruz-Gómez, MJ and Loza-Tavera, H. (2018). "Novel Metabolic Pathway For N-methylpyrrolidone Degradation in Alicycliphilus sp Strain BQ1". Appl Environ Microbiol. 84(1) | PUBMED: #29030443 |
| 11 | 2018 | Toledo-Leyva, A., Villegas-Pineda, J.C., Encarnación, S., Gallardo-Rincón, D. and Talamas-Rohana, P. (2018). "Effect of Ovarian Cancer Ascites on SKOV-3 Cells Proteome: New Proteins Associated with Aggressive Phenotype in Epithelial Ovarian Cancer". Proteome Sci. 16 | PUBMED: #29456457 |
| 12 | 2017 | Aragón, W., Reina-Pinto, J.J. and Serrano, M. (2017). "The Intimate Talk between Plants and Microorganisms at the Leaf Surface". J Exp Bot. 68(19):5339-5350 | PUBMED: #29136456 |
| 13 | 2017 | Balderas-Martinez, Y.I., Rinaldi, F., Contreras, G., Solano-Lira, H., Sánchez-Pérez, M., Collado-Vides, J., Selman, M. and Pardo, A. (2017). "Improving Biocuration Of microRNAs in Diseases: a Case Study in Idiopathic Pulmonary Fibrosis". Database-the Journal of Biological Databases and Curation. | PUBMED: #28605770 |
| 14 | 2017 | Bañuelos-Vazquez, L.A., Tejerizo, G.T. and Brom, S. (2017). "Regulation of Conjugative Transfer of Plasmids and Integrative Conjugative Elements". Plasmid. 91:82-89 | PUBMED: #28438469 |
| 15 | 2017 | Beardmore, R.E., Peña-Miller, R., Gori, F. and Iredell, J. (2017). "Antibiotic Cycling and Antibiotic Mixing: Which One Best Mitigates Antibiotic Resistance?". Mol Biol Evol. 34(4):802-817 | PUBMED: #28096304 |
| 16 | 2017 | Cruz-Dávalos, D.I., Llamas, B., Gaunitz, C., Fages, A., Gamba, C., Soubrier, J., Librado, P., Seguín-Orlando, A., Pruvost, M., Alfarhan, A.H., Alquraishi, S.A., Al-Rasheid, K.A.S., Scheu, A., Beneke, N., Ludwig, A., Cooper, A., Willerslev, E. and Orlando, L. (2017). "Experimental Conditions Improving in-solution Target Enrichment for Ancient DNA". Molecular Ecology Resources. 17(3):508-522 | PUBMED: #27566552 |
| 17 | 2017 | Cubillas, C., Miranda-Sánchez, F., González-Sánchez, A., Elizalde, J.P., Vinuesa, P., Brom, S. and (2017). "A Comprehensive Phylogenetic Analysis of Copper Transporting P-1b ATPases from Bacteria of the Rhizobiales Order Uncovers Multiplicity, Diversity and Novel Taxonomic Subtypes". Microbiologyopen. 6(4):-e452 | PUBMED: #28217917 |
| 18 | 2017 | Esposti, M.D. (2017). "A Journey across Genomes Uncovers the Origin of Ubiquinone in Cyanobacteria". Genome Biol. Evol.. 9(11):3039-3053 | PUBMED: #29106540 |
| 19 | 2017 | Esposti, M.D. and Martínez-Romero, E. (2017). "The Functional Microbiome of Arthropods". Plos One. 12(5) | PUBMED: #28475624 |
| 20 | 2017 | Fernández-Retana, J., Zamudio-Meza, H., Rodríguez-Morales, M., Pedroza-Torres, A., Isla-Ortíz, D., Herrera, L., Jacobo-Herrera, N., Peralta-Zaragoza, O., López-Camarillo, C., Morales-González, F., de León, D.C. and Pérez-Plasencia, C. (2017). "Gene Signature Based on Degradome-related Genes Can Predict Distal Metastasis in Cervical Cancer Patients". Tumor Biology. 39(6) | PUBMED: #28639897 |
| 21 | 2017 | Freyre-González, J.A. and Tauch, A. (2017). "Functional Architecture And Global Properties Of the Corynebacterium glutamicum Regulatory Network: Novel Insights from a Dataset with a High Genomic Coverage". Journal of Biotechnology. 257:199-210 | PUBMED: #27829123 |
| 22 | 2017 | Gil Valdes, J., Ramírez-Torres, A., Chiappe, D., Luna-Peñaloza, J., Fernández-Reyes, F.C., Arcos-Encarnación, B., Contreras-Martínez, S. and Encarnación, S. (2017). "Lysine Acetylation Stoichiometry and Proteomics Analyses Reveal Pathways Regulated by Sirtuin 1 in Human Cells". J Biol Chem. 292(44):18129-18144 | PUBMED: #28893905 |
| 23 | 2017 | González-Sánchez, A., Cubillas, C., Miranda, F., Dávalos, A. and García-de los Santos, A. (2017). "The ropAe Gene Encode a Porin-like Protein Involved in Copper Transit in Rhizobium etli CFN42". Microbiologyopen. | PUBMED: #29280343 |
| 24 | 2017 | Grana-Miraglia, L., Lozano, L., Velázquez, C., Volkow-Fernández, P., Pérez-Oseguera, A., Cevallos, M.A. and Castillo-Ramírez, S. (2017). "Rapid Gene Turnover as a Significant Source of Genetic Variation in a Recently Seeded Population of a Healthcare-associated Pathogen". Frontiers in Microbiology. 8:-1817 | PUBMED: #28979253 |
| 25 | 2017 | Hernández-Vargas, M.J., Gil Valdes, J., Lozano, L., Pedraza-Escalona, M., Ortíz, E., Encarnación, S., Alagon, A. and Corzo, G. (2017). "Proteomic And Transcriptomic Analysis Of Saliva Components from the Hematophagous Reduviid Triatoma Pallidipennis". Journal of Proteomics. 162:30-39 | PUBMED: #28442446 |
| 26 | 2017 | Iñiguez-Rabago, L.P., Ramirez, M., Barbazuk, W.B. and Hernández, G. (2017). "Identification and Analysis Of Alternative Splicing Events in Phaseolus vulgaris and Glycine max". BMC Genomics. 18:-650 | PUBMED: #28830361 |
| 27 | 2017 | Ledezma-Tejeida, D., Ishida, C. and Collado-Vides, J. (2017). "Genome-wide Mapping Of Transcriptional Regulation and Metabolism Describes Information-processing Units in Escherichia coli". Frontiers in Microbiology. 8 | PUBMED: #28824593 |
| 28 | 2017 | Link, V., Aguilar-Gomez, D., Ramírez-Suastegui, C., Hurst, L.D. and Cortéz, D. (2017). "Male Mutation Bias is the Main Force Shaping Chromosomal Substitution Rates in Monotreme Mammals". Genome Biol. Evol.. 9(9):2198-2210 | PUBMED: #28922870 |
| 29 | 2017 | López-Lara, I.M. and Geiger, O. (2017). "Bacterial Lipid Diversity". Bba-mol Cell Biol L. 1862(11):1287-1299 | PUBMED: #27760387 |
| 30 | 2017 | Marin, R., Cortéz, D., Lamanna, F., Pradeepa, M.M., Leushkin, E., Julien, P., Liechti, A., Halbert, J., Bruning, T., Mossinger, K., Trefzer, T., Conrad, C., Kerver, H.N., Wade, J., Tschopp, P. and Kaessmann, H. (2017). "Convergent Origination Of a Drosophila-like Dosage Compensation Mechanism in a Reptile Lineage". Genome Res. 27(12):1974-1987 | PUBMED: #29133310 |
| 31 | 2017 | Martinez-Flores, W.A., Palma-Garcia, J.M., Caballero-Ortega, H., Del Viento-Camacho, A., López-Escamilla, E., Martínez-Hernández, F., Vinuesa, P., Correa, D. and Maravilla, P. (2017). "Genotyping Toxoplasma Gondii with the B1 Gene in Naturally Infected Sheep from an Endemic Region in the Pacific Coast of Mexico". Vector-borne and Zoonotic Diseases. 17(7):495-502 | PUBMED: #28530509 |
| 32 | 2017 | Masforrol, Y., Gil Valdes, J., García, D., Noda, J., Ramos, Y., Betancourt, L., Guirola, O., González, S., Acevedo, B., Besada, V., Reyes, O. and González, L.J. (2017). "A Deeper Mining On the Protein Composition of VA-MENGOC-BC (r): an OMV-based Vaccine against N-meningitidis Serogroup B and C". Human Vaccines Anda Imminotheraéutics. 13(11):2548-2560 | PUBMED: #29083947 |
| 33 | 2017 | Méndez-Cruz, C.F., Gama-Castro, S., Mejia-Almonte, C., Castillo-Villalba, M.P., Muñíz-Rascado, L. and Collado-Vides, J. (2017). "First Steps In Automatic Summarization of Transcription Factor Properties for RegulonDB: Classification of Sentences about Structural Domains and Regulated Processes". Database-the Journal of Biological Databases and Curation. | PUBMED: #29220462 |
| 34 | 2017 | Ochoa-Sanchez, L.E. and Vinuesa, P. (2017). "Evolutionary Genetic Analysis Uncovers Multiple Species With Distinct Habitat Preferences and Antibiotic Resistance Phenotypes in the Stenotrophomonas maltophilia Complex". Frontiers in Microbiology. 8:-1548 | PUBMED: #28861062 |
| 35 | 2017 | Ortíz-Berrocal, M., Lozano, L., Sánchez-Flores, A., Nava, N., Hernández, G. and Reddy, P.M. (2017). "Expression In Rice of an Autoactive Variant of Medicago truncatula Dmi3, the Ca+2/calmodulin-dependent Protein Kinase from the Common Symbiotic Pathway Modifies Root Transcriptome and Improves Mycorrhizal Colonization". Plant Biotechnology Reports. 11(5):271-287 | |
| 36 | 2017 | Osorio, A., Camarena, L., Cevallos, M.A. and Poggio, S. (2017). "A New Essential Cell Division Protein in Caulobacter Crescentus". J Bacteriol. 199(8) | PUBMED: #28167520 |
| 37 | 2017 | Pannier, L., Merino, E., Marchal. K. and Collado-Vides, J. (2017). "Effect of Genomic Distance on Coexpression of Coregulated Genes in e. coli". Plos One. 12(4) | PUBMED: #28419102 |
| 38 | 2017 | Patiño-López, G. and Encarnación, S. (2017). "Clinical Proteomics in Mexico: where do We Stand?". Boletín Médico del Hospital Infantil de México. 74(3):173-174 | PUBMED: #29382483 |
| 39 | 2017 | Pérez-Morales, D., Banda, M.M., Chau, N.Y.E., Salgado, H., Martínez-Flores, I., Ibarra, J.A., Ilyas, B., Coombes, B.K. and Bustamante, V.H. (2017). "The Transcriptional Regulator Ssrb is Involved in a Molecular Switch Controlling Virulence Lifestyles of Salmonella". Plos Pathogens. 13(7):-e1006497 | PUBMED: #28704543 |
| 40 | 2017 | Pérez-Oseguera, A., Castro-Jaimes, S., Salgado-Camargo, A.D., Silva-Sánchez, J., Garza-González, E., Castillo-Ramírez, S. and Cevallos, M.A. (2017). "Complete Genome Sequence Of a blaOXA-58-producing Acinetobacter Baumannii Strain Isolated from a Mexican Hospital". Genome Announc. 5(36) | PUBMED: #28883144 |
| 41 | 2017 | Romero-Gutiérrez, T., Peguero-Sánchez, E., Cevallos, M.A., Batista, C.V.F., Ortíz, E. and Possani, L.D. (2017). "A Deeper Examination of Thorellius Atrox Scorpion Venom Components with Omic Techonologies". Toxins. 9(12):-399 | PUBMED: #29231872 |
| 42 | 2017 | Ruíz-Valdiviezo, V.M., Rogel, M.A., Guerrero, G., Rincón-Molina, C.I., García-Pérez, L.G., Villalobos-Maldonado, J.J., López-López, A., Martínez-Romero, E. and Rincón-Rosales, R. (2017). "Complete Genome Sequence Of A Novel Nonnodulating Rhizobium Species Isolated from Agave Americana L. Rhizosphere". Genome Announc. 5(46) | PUBMED: #29146860 |
| 43 | 2017 | Salleh, F.M., Ramos-Madriga, J., Peñaloza, F., Liu, S., Sinding, M.-H.S., Patel, R.P., Martins, R., Lenz, D., Roos, C., Shamsir, M.S., Azman, M.S., Lim, B.K., Rossiter, S.J., Wilting, A. and Gilbert, M.T.P. (2017). "An Expanded Mammal Mitogenome Dataset from Southeast Asia". Gigascience. 6(8):1-8 | PUBMED: #28873965 |
| 44 | 2017 | Sandoval-Calderón, M., Guan, Z.Q. and Sohlenkamp, C. (2017). "Knowns and Unknowns of Membrane Lipid Synthesis in Streptomycetes". Biochimie. 141:21-29 | PUBMED: #28522365 |
| 45 | 2017 | Santamaria, R.I., Bustos, P., Pérez-Carrascal O.M, Miranda-Sánchez, F., Vinuesa, P., Martínez-Flores, I., Juárez, S., Lozano, L., Martínez-Romero, E., Cevallos, M.A., Ormeño-Orrillo, E. and González, V. (2017). "Complete Genome Sequences Of Eight Rhizobium Symbionts Associated With Common Bean (Phaseolus vulgaris)". Genome Announc. 5(30) | PUBMED: #28751391 |
| 46 | 2017 | Santillán, O., Ramírez-Romero, M.Á. and Dávila, G. (2017). "CAPRRESI: Chimera Assembly By Plasmid Recovery and Restriction Enzyme Site Insertion". Jove-journal of Visualized Experiments. (124)-e55526 | PUBMED: #28671650 |
| 47 | 2017 | Saucedo-Mora, M.A., Castaneda-Tamez, P., Cazares, A., Pérez-Velázquez, J., Hense, B.A., Cazares, D., Figueroa, W., Carballo, M., Guarneros, G., Pérez-Eretza, B., Cruz, N., Nishiyama, Y., Maeda, T., Belmont-Díaz, J.A., Wood, T.K. and García-Contreras, R. (2017). "Selection Of Functional Quorum Sensing Systems by Lysogenic Bacteriophages in Pseudomonas Aeruginosa". Frontiers in Microbiology. 8:-1669 | PUBMED: #28912771 |
| 48 | 2017 | Sigala, J.C., Suárez, B.P., Lara, A.R., Le Borgne, S., Bustos, P., Santamaria, R.I., González, V. and Martínez, A. (2017). "Genomic and Physiological Characterization Of a Laboratory-isolated Acinetobacter Schindleri ACE Strain that Quickly and Efficiently Catabolizes Acetate". Microbiology-sgm. 163(7):1052-1064 | PUBMED: #28671531 |
| 49 | 2017 | Silva, C., Betancor, L., García, C., Astocondor, L., Hinostroza, N., Bisio, J., Rivera, J., Perezgasga, L., Escanda, V.P., Yim, L., Jacobs, J., García-del Portillo, F., Chabalgoity, J.A. and Puente, J.L. (2017). "Characterization Of Salmonella enterica Isolates Causing Bacteremia in Lima, Peru, Using Multiple Typing Methods". Plos One. 12(12):-e0189946 | PUBMED: #29267322 |
| 50 | 2017 | Vargas, M.C., Mora, Y., Díaz-Mendez, R., Martínez-Batallar, Á.G., Girard, L., Encarnación, S., Peralta, H. and Mora, J. (2017). "Overproduction Of Sinorhizobium meliloti argC (N-acetyl-gamma-glutamyl Phosphate Reductase) Promotes Growth Delay and Inefficient Nodules". FEMS Microbiol Lett. 364(23):-fnx233 | PUBMED: #29121239 |
| 51 | 2017 | Vera-Ponce de León, A., Ormeno-Orrillo, E., Ramírez-Puebla, T., Rosenblueth, M., Esposti, M.D., Martínez, J. and Martínez-Romero, E. (2017). "Candidatus Dactylopiibacterium Carminicum, A Nitrogen-fixing Symbiont Of Dactylopius Cochineal Insects (Hemiptera: COCCOIDEA: DACTYLOPIIDAE)". Genome Biol. Evol.. 9(9):2237-2250 | |
| 52 | 2017 | Wu, Z.Q., Sloan, D.B., Brown, C.W., Rosenblueth, M., Palmer, J.D. and Ong, H.C. (2017). "Mitochondrial Retroprocessing Promoted Functional Transfers of rpl5 to the Nucleus in Grasses". Mol Biol Evol. 34(9):2340-2354 | PUBMED: #28541477 |
